Search Results - "Aarestrup FM"

Prevalence of extended-spectrum cephalosporinase (ESC)-producing Escherichia coli in Danish slaughter pigs and retail meat identified by selective enrichment and association with cephalosporin usage.

Authors: Agersø Y Aarestrup FM Pedersen K et al.

Source: Journal of Antimicrobial Chemotherapy (JAC). Mar2012, Vol. 67 Issue 3, p582-588. 7p.

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Identification of acquired antimicrobial resistance genes.

Authors: Zankari E Hasman H Cosentino S et al.

Source: Journal of Antimicrobial Chemotherapy (JAC). Nov2012, Vol. 67 Issue 11, p2640-2644. 5p.

Antimicrobial-resistant Shigella infections from Iran: an overlooked problem?

Authors: Tajbakhsh M García Migura L Rahbar M et al.

Source: Journal of Antimicrobial Chemotherapy (JAC). May2012, Vol. 67 Issue 5, p1128-1133. 6p.

Capacity building for genomic surveillance of mpox and other emerging diseases in resource-limited settings within the African Great Lakes region.

Authors: Schuele L Nzoyikorera N Udahemuka JC et al.

Source: Communications medicine [Commun Med (Lond)] 2026 Jun 24; Vol. 6 (1). Date of Electronic Publication: 2026 Jun 24.

Publication Type: Journal Article; Review

Journal Info: Publisher: Nature Portfolio Country of Publication: England NLM ID: 9918250414506676 Publication Model: Electronic Cited Medium: Internet ISSN: 2730-664X (Electronic) Linking ISSN: 2730664X NLM ISO Abbreviation: Commun Med (Lond) Subsets: PubMed not MEDLINE

Whole-genome prediction of bacterial pathogenic capacity on novel bacteria using protein language models with PathogenFinder2.

Authors: Ferrer Florensa A Almagro Armenteros JJ Kaas RS et al.

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2026 May 03; Vol. 42 (5).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Genomic and functional co-diversification imprint African Hominidae microbiomes to signal dietary and lifestyle adaptations.

Authors: Otani S Louise Jespersen M Brinch C et al.

Source: Gut microbes [Gut Microbes] 2025 Dec; Vol. 17 (1), pp. 2484385. Date of Electronic Publication: 2025 Mar 31.

Publication Type: Journal Article

Journal Info: Publisher: Taylor & Francis Country of Publication: United States NLM ID: 101495343 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1949-0984 (Electronic) Linking ISSN: 19490976 NLM ISO Abbreviation: Gut Microbes Subsets: MEDLINE

Geographics and bacterial networks differently shape the acquired and latent global sewage resistomes.

Authors: Martiny HM Munk P Fuschi A et al.

Corporate Authors: Martiny HM Munk P Fuschi A et al.

Source: Nature communications [Nat Commun] 2025 Nov 21; Vol. 16 (1), pp. 10278. Date of Electronic Publication: 2025 Nov 21.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Antibiotic resistance selection and deselection in municipal wastewater from 47 countries.

Authors: Yu Z Gray DA Fick J et al.

Source: Nature communications [Nat Commun] 2025 Nov 03; Vol. 16 (1), pp. 9698. Date of Electronic Publication: 2025 Nov 03.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Impact of ceftiofur administration and Escherichia coli inoculation on the calf fecal microbiome.

Authors: Sommer AJ Ferrandis-Vila M Mamerow S et al.

Source: MSystems [mSystems] 2026 Jun 09, pp. e0050126. Date of Electronic Publication: 2026 Jun 09.

Publication Type: Journal Article

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101680636 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2379-5077 (Electronic) Linking ISSN: 23795077 NLM ISO Abbreviation: mSystems Subsets: MEDLINE

Genomic characterization of a novel human astrovirus MLB1 variant from Tanzania.

Authors: Shayo MJ Kuchaka D Beti M et al.

Source: Virology [Virology] 2026 Jun; Vol. 619, pp. 110861. Date of Electronic Publication: 2026 Mar 03.

Publication Type: Journal Article

Journal Info: Publisher: Academic Press Country of Publication: United States NLM ID: 0110674 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1096-0341 (Electronic) Linking ISSN: 00426822 NLM ISO Abbreviation: Virology Subsets: MEDLINE

A Hadza-enriched Prevotella/Segatella xyloglucanase shows sequence conservation and functional specialization.

Authors: Louise Jespersen M Kjærgaard Munk K Fjermedal S et al.

Source: Gut microbes reports [Gut Microbes Rep] 2026 May 16; Vol. 3 (1), pp. 2673265. Date of Electronic Publication: 2026 May 16 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Taylor & Francis Country of Publication: United States NLM ID: 9918787563106676 Publication Model: eCollection Cited Medium: Internet ISSN: 2993-3935 (Electronic) Linking ISSN: 29933935 NLM ISO Abbreviation: Gut Microbes Rep Subsets: PubMed not MEDLINE

The role of whole genome sequencing in antimicrobial susceptibility prediction of bacteria: 2025 update from the European Committee on Antimicrobial Susceptibility Testing Subcommittee.

Authors: Samuelsen Ø López-Causapé C Aarestrup FM et al.

Source: Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases [Clin Microbiol Infect] 2026 May 15. Date of Electronic Publication: 2026 May 15.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Country of Publication: England NLM ID: 9516420 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1469-0691 (Electronic) Linking ISSN: 1198743X NLM ISO Abbreviation: Clin Microbiol Infect Subsets: MEDLINE

Metagenomics provides broad detection of pathogens, antimicrobial resistance, and virulence genes in pig diarrhoea and complement conventional methods.

Authors: Ivanova M Svensmark B Bruun Jensen EE et al.

Source: Animal microbiome [Anim Microbiome] 2026 Apr 28; Vol. 8 (1). Date of Electronic Publication: 2026 Apr 28.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101759457 Publication Model: Electronic Cited Medium: Internet ISSN: 2524-4671 (Electronic) Linking ISSN: 25244671 NLM ISO Abbreviation: Anim Microbiome Subsets: PubMed not MEDLINE

Urban sewage resistomes partially reflect clinical resistomes.

Authors: Thorn AV Brinch C Aarestrup FM et al.

Source: MSystems [mSystems] 2026 Apr 21; Vol. 11 (4), pp. e0003126. Date of Electronic Publication: 2026 Mar 13.

Publication Type: Journal Article

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101680636 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2379-5077 (Electronic) Linking ISSN: 23795077 NLM ISO Abbreviation: mSystems Subsets: MEDLINE

Genomic diversity of human adenoviruses in Tanzanian children under five: Insights into F40, F41, B, and rare A18 genotypes.

Authors: Shayo MJ Kuchaka D Beti M et al.

Corporate Authors: Shayo MJ Kuchaka D Beti M et al.

Source: Virology [Virology] 2026 Apr; Vol. 617, pp. 110813. Date of Electronic Publication: 2026 Jan 23.

Publication Type: Journal Article

Journal Info: Publisher: Academic Press Country of Publication: United States NLM ID: 0110674 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1096-0341 (Electronic) Linking ISSN: 00426822 NLM ISO Abbreviation: Virology Subsets: MEDLINE

Assembly-free typing of Nanopore and Illumina data through proximity scoring with KMA.

Authors: Clausen PTLC Hallgren MB Overballe-Petersen S et al.

Source: NAR genomics and bioinformatics [NAR Genom Bioinform] 2025 Sep 01; Vol. 7 (3), pp. lqaf116. Date of Electronic Publication: 2025 Sep 01 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101756213 Publication Model: eCollection Cited Medium: Internet ISSN: 2631-9268 (Electronic) Linking ISSN: 26319268 NLM ISO Abbreviation: NAR Genom Bioinform Subsets: MEDLINE

Investigation of mobile genetic elements and their association with antibiotic resistance genes in clinical pathogens worldwide.

Authors: Johansson MHK Petersen TN Nag S et al.

Source: PloS one [PLoS One] 2025 Aug 18; Vol. 20 (8), pp. e0330304. Date of Electronic Publication: 2025 Aug 18 (Print Publication: 2025).

Publication Type: Journal Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

One day in Denmark: whole-genome sequence-based analysis of Escherichia coli isolates from clinical settings.

Authors: Rebelo AR Bortolaia V Leekitcharoenphon P et al.

Source: The Journal of antimicrobial chemotherapy [J Antimicrob Chemother] 2025 Apr 02; Vol. 80 (4), pp. 1011-1021.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 7513617 Publication Model: Print Cited Medium: Internet ISSN: 1460-2091 (Electronic) Linking ISSN: 03057453 NLM ISO Abbreviation: J Antimicrob Chemother Subsets: MEDLINE

Surgical induction model of femoral defect in Wistar rats for bone repair histology.

Authors: Oliveira FLD Nagato AC França TN et al.

Source: Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologicas [Braz J Med Biol Res] 2026 Mar 30; Vol. 59, pp. e15168. Date of Electronic Publication: 2026 Mar 30 (Print Publication: 2026).

Publication Type: Journal Article

Journal Info: Publisher: Associação Brasileira de Divulgação Científica Country of Publication: Brazil NLM ID: 8112917 Publication Model: eCollection Cited Medium: Internet ISSN: 1414-431X (Electronic) Linking ISSN: 0100879X NLM ISO Abbreviation: Braz J Med Biol Res Subsets: MEDLINE