Search Results - "Davis-Turak J"

A 1-year study on SARS-CoV-2 variant shifts in wastewater using dPCR: comparison with clinical and GISAID data.

Authors: Mosavi SMR Acer P Andersen P et al.

Source: MSystems [mSystems] 2025 Nov 18; Vol. 10 (11), pp. e0022925. Date of Electronic Publication: 2025 Oct 22.

Publication Type: Journal Article; Comparative Study

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101680636 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2379-5077 (Electronic) Linking ISSN: 23795077 NLM ISO Abbreviation: mSystems Subsets: MEDLINE

Mathematical modeling identifies potential gene structure determinants of co-transcriptional control of alternative pre-mRNA splicing.

Authors: Davis-Turak J Johnson TL Hoffmann A

Source: Nucleic acids research [Nucleic Acids Res] 2019 Feb 20; Vol. 47 (3), pp. 1602-1603.

Publication Type: Journal Article; Published Erratum

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: PubMed not MEDLINE

Mathematical modeling identifies potential gene structure determinants of co-transcriptional control of alternative pre-mRNA splicing.

Authors: Davis-Turak J Johnson TL Hoffmann A

Source: Nucleic acids research [Nucleic Acids Res] 2018 Nov 16; Vol. 46 (20), pp. 10598-10607.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res

CRISPR-mediated generation and characterization of a Gaa homozygous c.1935C>A (p.D645E) Pompe disease knock-in mouse model recapitulating human infantile onset-Pompe disease.

Authors: Kan SH Huang JY Harb J et al.

Source: Scientific reports [Sci Rep] 2022 Dec 14; Vol. 12 (1), pp. 21576. Date of Electronic Publication: 2022 Dec 14.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

A Method for Variant Agnostic Detection of SARS-CoV-2, Rapid Monitoring of Circulating Variants, and Early Detection of Emergent Variants Such as Omicron.

Authors: Lai E Kennedy EB Lozach J et al.

Source: Journal of clinical microbiology [J Clin Microbiol] 2022 Jul 20; Vol. 60 (7), pp. e0034222. Date of Electronic Publication: 2022 Jun 29.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 7505564 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-660X (Electronic) Linking ISSN: 00951137 NLM ISO Abbreviation: J Clin Microbiol Subsets: MEDLINE

Identification of Omicron-Delta Coinfections Using PCR-Based Genotyping.

Authors: Roychoudhury P Luo S Hayashibara K et al.

Source: Microbiology spectrum [Microbiol Spectr] 2022 Jun 29; Vol. 10 (3), pp. e0060522. Date of Electronic Publication: 2022 May 03.

Publication Type: Letter; Research Support, N.I.H., Extramural

Journal Info: Publisher: ASM Press Country of Publication: United States NLM ID: 101634614 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2165-0497 (Electronic) Linking ISSN: 21650497 NLM ISO Abbreviation: Microbiol Spectr Subsets: MEDLINE

A multiancestral genome-wide exome array study of Alzheimer disease, frontotemporal dementia, and progressive supranuclear palsy.

Authors: Chen JA Wang Q Davis-Turak J et al.

Source: JAMA neurology [JAMA Neurol] 2015 Apr; Vol. 72 (4), pp. 414-22.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: American Medical Association Country of Publication: United States NLM ID: 101589536 Publication Model: Print Cited Medium: Internet ISSN: 2168-6157 (Electronic) Linking ISSN: 21686149 NLM ISO Abbreviation: JAMA Neurol Subsets: MEDLINE

A multi-scale approach reveals that NF-κB cRel enforces a B-cell decision to divide.

Authors: Shokhirev MN Almaden J Davis-Turak J et al.

Source: Molecular systems biology [Mol Syst Biol] 2015 Feb 13; Vol. 11 (1), pp. 783. Date of Electronic Publication: 2015 Feb 13.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: EMBO Press Country of Publication: Germany NLM ID: 101235389 Publication Model: Electronic Cited Medium: Internet ISSN: 1744-4292 (Electronic) Linking ISSN: 17444292 NLM ISO Abbreviation: Mol Syst Biol Subsets: MEDLINE

Control of RelB during dendritic cell activation integrates canonical and noncanonical NF-κB pathways.

Authors: Shih VF Davis-Turak J Macal M et al.

Source: Nature immunology [Nat Immunol] 2012 Dec; Vol. 13 (12), pp. 1162-70. Date of Electronic Publication: 2012 Oct 21.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Nature America Inc Country of Publication: United States NLM ID: 100941354 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1529-2916 (Electronic) Linking ISSN: 15292908 NLM ISO Abbreviation: Nat Immunol Subsets: MEDLINE

CRISPR-Cas9 generated Pompe knock-in murine model exhibits early-onset hypertrophic cardiomyopathy and skeletal muscle weakness.

Authors: Huang JY Kan SH Sandfeld EK et al.

Source: Scientific reports [Sci Rep] 2020 Jun 25; Vol. 10 (1), pp. 10321. Date of Electronic Publication: 2020 Jun 25.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

Dissecting the Regulatory Strategies of NF-κB RelA Target Genes in the Inflammatory Response Reveals Differential Transactivation Logics.

Authors: Ngo KA Kishimoto K Davis-Turak J et al.

Source: Cell reports [Cell Rep] 2020 Feb 25; Vol. 30 (8), pp. 2758-2775.e6.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101573691 Publication Model: Print Cited Medium: Internet ISSN: 2211-1247 (Electronic) NLM ISO Abbreviation: Cell Rep Subsets: MEDLINE

Genomics pipelines and data integration: challenges and opportunities in the research setting.

Authors: Davis-Turak J Courtney SM Hazard ES et al.

Source: Expert review of molecular diagnostics [Expert Rev Mol Diagn] 2017 Mar; Vol. 17 (3), pp. 225-237. Date of Electronic Publication: 2017 Jan 25.

Publication Type: Journal Article; Review; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural

Journal Info: Publisher: Taylor & Francis Country of Publication: England NLM ID: 101120777 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1744-8352 (Electronic) Linking ISSN: 14737159 NLM ISO Abbreviation: Expert Rev Mol Diagn Subsets: MEDLINE

B-cell survival and development controlled by the coordination of NF-κB family members RelB and cRel.

Authors: Almaden JV Liu YC Yang E et al.

Source: Blood [Blood] 2016 Mar 10; Vol. 127 (10), pp. 1276-86. Date of Electronic Publication: 2016 Jan 14.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Elsevier Country of Publication: United States NLM ID: 7603509 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1528-0020 (Electronic) Linking ISSN: 00064971 NLM ISO Abbreviation: Blood Subsets: MEDLINE

A Systems-Level Analysis of the Peripheral Nerve Intrinsic Axonal Growth Program.

Authors: Chandran V Coppola G Nawabi H et al.

Source: Neuron [Neuron] 2016 Mar 02; Vol. 89 (5), pp. 956-70. Date of Electronic Publication: 2016 Feb 18.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 8809320 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-4199 (Electronic) Linking ISSN: 08966273 NLM ISO Abbreviation: Neuron Subsets: MEDLINE

IκBε is a key regulator of B cell expansion by providing negative feedback on cRel and RelA in a stimulus-specific manner.

Authors: Alves BN Tsui R Almaden J et al.

Source: Journal of immunology (Baltimore, Md. : 1950) [J Immunol] 2014 Apr 01; Vol. 192 (7), pp. 3121-32. Date of Electronic Publication: 2014 Mar 03.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 2985117R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1550-6606 (Electronic) Linking ISSN: 00221767 NLM ISO Abbreviation: J Immunol Subsets: MEDLINE

Human-specific transcriptional networks in the brain.

Authors: Konopka G Friedrich T Davis-Turak J et al.

Source: Neuron [Neuron] 2012 Aug 23; Vol. 75 (4), pp. 601-17.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 8809320 Publication Model: Print Cited Medium: Internet ISSN: 1097-4199 (Electronic) Linking ISSN: 08966273 NLM ISO Abbreviation: Neuron Subsets: MEDLINE

Transcriptional architecture of the primate neocortex.

Authors: Bernard A Lubbers LS Tanis KQ et al.

Source: Neuron [Neuron] 2012 Mar 22; Vol. 73 (6), pp. 1083-99. Date of Electronic Publication: 2012 Mar 21.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 8809320 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-4199 (Electronic) Linking ISSN: 08966273 NLM ISO Abbreviation: Neuron Subsets: MEDLINE

A multiplex RNA-seq strategy to profile poly(A+) RNA: application to analysis of transcription response and 3' end formation.

Authors: Fox-Walsh K Davis-Turak J Zhou Y et al.

Source: Genomics [Genomics] 2011 Oct; Vol. 98 (4), pp. 266-71. Date of Electronic Publication: 2011 Apr 15.

Publication Type: Evaluation Study; Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: Academic Press Country of Publication: United States NLM ID: 8800135 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1089-8646 (Electronic) Linking ISSN: 08887543 NLM ISO Abbreviation: Genomics Subsets: MEDLINE

Tauopathy with paired helical filaments in an aged chimpanzee.

Authors: Rosen RF Farberg AS Gearing M et al.

Source: The Journal of comparative neurology [J Comp Neurol] 2008 Jul 20; Vol. 509 (3), pp. 259-70.

Publication Type: Case Reports; Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Wiley-Liss Country of Publication: United States NLM ID: 0406041 Publication Model: Print Cited Medium: Internet ISSN: 1096-9861 (Electronic) Linking ISSN: 00219967 NLM ISO Abbreviation: J Comp Neurol Subsets: MEDLINE