Search Results - "DeRaad DA"

Multispecies pangenomes reveal a pervasive influence of population size on structural variation.

Authors: Edwards SV Fang B Khost D et al.

Source: Science (New York, N.Y.) [Science] 2025 Dec 11; Vol. 390 (6778), pp. eadw1931. Date of Electronic Publication: 2025 Dec 11.

Publication Type: Journal Article

Journal Info: Publisher: American Association for the Advancement of Science Country of Publication: United States NLM ID: 0404511 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1095-9203 (Electronic) Linking ISSN: 00368075 NLM ISO Abbreviation: Science Subsets: MEDLINE

Strong selection maintains a narrow, stable tension zone between grosbeak species in the Great Plains.

Authors: DeRaad DA Alderson JD Geiman CO et al.

Source: Evolution; international journal of organic evolution [Evolution] 2025 Nov 17; Vol. 79 (11), pp. 2563-2574.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: United States NLM ID: 0373224 Publication Model: Print Cited Medium: Internet ISSN: 1558-5646 (Electronic) Linking ISSN: 00143820 NLM ISO Abbreviation: Evolution Subsets: MEDLINE

De novo assembly of a chromosome-level reference genome for the California Scrub-Jay, Aphelocoma californica.

Authors: DeRaad DA Escalona M Benham PM et al.

Source: The Journal of heredity [J Hered] 2023 Nov 15; Vol. 114 (6), pp. 669-680.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural

Journal Info: Publisher: Oxford University Press For The American Genetic Association Country of Publication: United States NLM ID: 0375373 Publication Model: Print Cited Medium: Internet ISSN: 1465-7333 (Electronic) Linking ISSN: 00221503 NLM ISO Abbreviation: J Hered Subsets: MEDLINE

A highly contiguous reference genome for the Steller's jay (Cyanocitta stelleri).

Authors: Benham PM Cicero C DeRaad DA et al.

Source: The Journal of heredity [J Hered] 2023 Aug 23; Vol. 114 (5), pp. 549-560.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Oxford University Press For The American Genetic Association Country of Publication: United States NLM ID: 0375373 Publication Model: Print Cited Medium: Internet ISSN: 1465-7333 (Electronic) Linking ISSN: 00221503 NLM ISO Abbreviation: J Hered Subsets: MEDLINE

Comparative population pangenomes reveal unexpected complexity and fitness effects of structural variants.

Authors: Edwards SV Fang B Khost D et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2025 Feb 13. Date of Electronic Publication: 2025 Feb 13.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Combining Species Delimitation, Species Trees, and Tests for Gene Flow Clarifies Complex Speciation in Scrub-Jays.

Authors: DeRaad DA McCormack JE Chen N et al.

Source: Systematic biology [Syst Biol] 2022 Oct 12; Vol. 71 (6), pp. 1453-1470.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9302532 Publication Model: Print Cited Medium: Internet ISSN: 1076-836X (Electronic) Linking ISSN: 10635157 NLM ISO Abbreviation: Syst Biol Subsets: MEDLINE

A Next Generation of Hierarchical Bayesian Analyses of Hybrid Zones Enables Model-Based Quantification of Variation in Introgression in R.

Authors: Gompert Z DeRaad DA Buerkle CA

Source: Ecology and evolution [Ecol Evol] 2024 Nov 21; Vol. 14 (11), pp. e70548. Date of Electronic Publication: 2024 Nov 21 (Print Publication: 2024).

Publication Type: Journal Article

Journal Info: Publisher: Blackwell Pub. Ltd Country of Publication: England NLM ID: 101566408 Publication Model: eCollection Cited Medium: Print ISSN: 2045-7758 (Print) Linking ISSN: 20457758 NLM ISO Abbreviation: Ecol Evol Subsets: PubMed not MEDLINE

Genomic patterns in the dwarf kingfishers of northern Melanesia reveal a mechanistic framework explaining the paradox of the great speciators.

Authors: DeRaad DA Files AN DeCicco LH et al.

Source: Evolution letters [Evol Lett] 2024 Jul 26; Vol. 8 (6), pp. 813-827. Date of Electronic Publication: 2024 Jul 26 (Print Publication: 2024).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101715791 Publication Model: eCollection Cited Medium: Internet ISSN: 2056-3744 (Electronic) Linking ISSN: 20563744 NLM ISO Abbreviation: Evol Lett Subsets: PubMed not MEDLINE

Parallel evolution in an island archipelago revealed by genomic sequencing of Hipposideros leaf-nosed bats.

Authors: Lavery TH DeRaad DA Holland PS et al.

Source: Evolution; international journal of organic evolution [Evolution] 2024 May 29; Vol. 78 (6), pp. 1183-1192.

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: United States NLM ID: 0373224 Publication Model: Print Cited Medium: Internet ISSN: 1558-5646 (Electronic) Linking ISSN: 00143820 NLM ISO Abbreviation: Evolution Subsets: MEDLINE

A complete species-level phylogeny of the Erythrura parrotfinches (Aves: Estrildidae).

Authors: DeCicco LH DeRaad DA Ostrow EN et al.

Source: Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2023 Oct; Vol. 187, pp. 107883. Date of Electronic Publication: 2023 Jul 21.

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Academic Press Country of Publication: United States NLM ID: 9304400 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1095-9513 (Electronic) Linking ISSN: 10557903 NLM ISO Abbreviation: Mol Phylogenet Evol Subsets: MEDLINE

Mitonuclear discordance results from incomplete lineage sorting, with no detectable evidence for gene flow, in a rapid radiation of Todiramphus kingfishers.

Authors: DeRaad DA McCullough JM DeCicco LH et al.

Source: Molecular ecology [Mol Ecol] 2023 Sep; Vol. 32 (17), pp. 4844-4862. Date of Electronic Publication: 2023 Jul 29.

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, N.I.H., Extramural

Journal Info: Publisher: Blackwell Scientific Publications Country of Publication: England NLM ID: 9214478 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1365-294X (Electronic) Linking ISSN: 09621083 NLM ISO Abbreviation: Mol Ecol Subsets: MEDLINE

An elevational shift facilitated the Mesoamerican diversification of Azure-hooded Jays (Cyanolyca cucullata) during the Great American Biotic Interchange.

Authors: McCormack JE Hill MM DeRaad DA et al.

Source: Ecology and evolution [Ecol Evol] 2023 Aug 15; Vol. 13 (8), pp. e10411. Date of Electronic Publication: 2023 Aug 15 (Print Publication: 2023).

Publication Type: Journal Article

Journal Info: Publisher: Blackwell Pub. Ltd Country of Publication: England NLM ID: 101566408 Publication Model: eCollection Cited Medium: Print ISSN: 2045-7758 (Print) Linking ISSN: 20457758 NLM ISO Abbreviation: Ecol Evol Subsets: PubMed not MEDLINE

Temporal stability of the hybrid zone between Calocitta magpie-jays revealed through comparison of museum specimens and iNaturalist photos.

Authors: Pizarro AK DeRaad DA McCormack JE

Source: Ecology and evolution [Ecol Evol] 2023 Mar 15; Vol. 13 (3), pp. e9863. Date of Electronic Publication: 2023 Mar 15 (Print Publication: 2023).

Publication Type: Journal Article

Journal Info: Publisher: Blackwell Pub. Ltd Country of Publication: England NLM ID: 101566408 Publication Model: eCollection Cited Medium: Print ISSN: 2045-7758 (Print) Linking ISSN: 20457758 NLM ISO Abbreviation: Ecol Evol Subsets: PubMed not MEDLINE

Hybrid zone or hybrid lineage: a genomic reevaluation of Sibley's classic species conundrum in Pipilo towhees.

Authors: DeRaad DA Applewhite EE Tsai WLE et al.

Source: Evolution; international journal of organic evolution [Evolution] 2023 Mar 01; Vol. 77 (3), pp. 852-869.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Oxford University Press Country of Publication: United States NLM ID: 0373224 Publication Model: Print Cited Medium: Internet ISSN: 1558-5646 (Electronic) Linking ISSN: 00143820 NLM ISO Abbreviation: Evolution Subsets: MEDLINE

snpfiltr: An R package for interactive and reproducible SNP filtering.

Authors: DeRaad DA; Department of Ecology & Evolutionary Biology and Biodiversity Institute, University of Kansas, Lawrence, Kansas, USA.

Source: Molecular ecology resources [Mol Ecol Resour] 2022 Aug; Vol. 22 (6), pp. 2443-2453. Date of Electronic Publication: 2022 Apr 24.

Publication Type: Journal Article

Journal Info: Publisher: Blackwell Country of Publication: England NLM ID: 101465604 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1755-0998 (Electronic) Linking ISSN: 1755098X NLM ISO Abbreviation: Mol Ecol Resour Subsets: MEDLINE

Population connectivity across a highly fragmented distribution: Phylogeography of the Chalcophaps doves.

Authors: DeRaad DA Manthey JD Ostrow EN et al.

Source: Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2022 Jan; Vol. 166, pp. 107333. Date of Electronic Publication: 2021 Oct 21.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Academic Press Country of Publication: United States NLM ID: 9304400 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1095-9513 (Electronic) Linking ISSN: 10557903 NLM ISO Abbreviation: Mol Phylogenet Evol Subsets: MEDLINE

Genome-environment association methods comparison supports omnigenic adaptation to ecological niche in malaria vector mosquitoes.

Authors: DeRaad DA Cobos ME Alkishe A et al.

Source: Molecular ecology [Mol Ecol] 2021 Dec; Vol. 30 (23), pp. 6468-6485. Date of Electronic Publication: 2021 Aug 11.

Publication Type: Journal Article

Journal Info: Publisher: Blackwell Scientific Publications Country of Publication: England NLM ID: 9214478 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1365-294X (Electronic) Linking ISSN: 09621083 NLM ISO Abbreviation: Mol Ecol Subsets: MEDLINE

Geographic potential of the world's largest hornet, Vespa mandarinia Smith (Hymenoptera: Vespidae), worldwide and particularly in North America.

Authors: Nuñez-Penichet C Osorio-Olvera L Gonzalez VH et al.

Source: PeerJ [PeerJ] 2021 Jan 13; Vol. 9, pp. e10690. Date of Electronic Publication: 2021 Jan 13 (Print Publication: 2021).

Publication Type: Journal Article

Journal Info: Publisher: PeerJ Inc Country of Publication: United States NLM ID: 101603425 Publication Model: eCollection Cited Medium: Print ISSN: 2167-8359 (Print) Linking ISSN: 21678359 NLM ISO Abbreviation: PeerJ Subsets: PubMed not MEDLINE