Search Results - "Fisher CK"

Increasing acceptance of AI-generated digital twins through clinical trial applications.

Authors: Vidovszky AA Fisher CK Loukianov AD et al.

Source: Clinical and translational science [Clin Transl Sci] 2024 Jul; Vol. 17 (7), pp. e13897.

Publication Type: Journal Article

Journal Info: Publisher: WileyBlackwell Pub Country of Publication: United States NLM ID: 101474067 Publication Model: Print Cited Medium: Internet ISSN: 1752-8062 (Electronic) Linking ISSN: 17528054 NLM ISO Abbreviation: Clin Transl Sci Subsets: MEDLINE

Standard machine learning approaches outperform deep representation learning on phenotype prediction from transcriptomics data.

Authors: Smith AM Walsh JR Long J et al.

Source: BMC bioinformatics [BMC Bioinformatics] 2020 Mar 20; Vol. 21 (1), pp. 119. Date of Electronic Publication: 2020 Mar 20.

Publication Type: Journal Article

Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105 (Electronic) Linking ISSN: 14712105 NLM ISO Abbreviation: BMC Bioinformatics Subsets: MEDLINE

Variable habitat conditions drive species covariation in the human microbiota.

Authors: Fisher CK Mora T Walczak AM

Source: PLoS computational biology [PLoS Comput Biol] 2017 Apr 27; Vol. 13 (4), pp. e1005435. Date of Electronic Publication: 2017 Apr 27 (Print Publication: 2017).

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

Bayesian Feature Selection with Strongly Regularizing Priors Maps to the Ising Model.

Authors: Fisher CK Mehta P

Source: Neural computation [Neural Comput] 2015 Nov; Vol. 27 (11), pp. 2411-22. Date of Electronic Publication: 2015 Sep 17.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: MIT Press Country of Publication: United States NLM ID: 9426182 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1530-888X (Electronic) Linking ISSN: 08997667 NLM ISO Abbreviation: Neural Comput Subsets: PubMed not MEDLINE

Satellite Flood Inundation Assessment and Forecast Using SMAP and Landsat.

Authors: Du J Kimball JS Sheffield J et al.

Source: IEEE journal of selected topics in applied earth observations and remote sensing [IEEE J Sel Top Appl Earth Obs Remote Sens] 2021; Vol. 14, pp. 6707-6715. Date of Electronic Publication: 2021 Jun 25.

Publication Type: Journal Article

Journal Info: Publisher: Institute of Electrical and Electronics Engineers Country of Publication: United States NLM ID: 101708799 Publication Model: Print-Electronic Cited Medium: Print ISSN: 1939-1404 (Print) Linking ISSN: 19391404 NLM ISO Abbreviation: IEEE J Sel Top Appl Earth Obs Remote Sens Subsets: PubMed not MEDLINE

Bayesian feature selection for high-dimensional linear regression via the Ising approximation with applications to genomics.

Authors: Fisher CK Mehta P

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2015 Jun 01; Vol. 31 (11), pp. 1754-61. Date of Electronic Publication: 2015 Jan 24.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Identifying keystone species in the human gut microbiome from metagenomic timeseries using sparse linear regression.

Authors: Fisher CK Mehta P

Source: PloS one [PLoS One] 2014 Jul 23; Vol. 9 (7), pp. e102451. Date of Electronic Publication: 2014 Jul 23 (Print Publication: 2014).

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Machine learning for comprehensive forecasting of Alzheimer's Disease progression.

Authors: Fisher CK Smith AM Walsh JR

Corporate Authors: Fisher CK Smith AM Walsh JR

Source: Scientific reports [Sci Rep] 2019 Sep 20; Vol. 9 (1), pp. 13622. Date of Electronic Publication: 2019 Sep 20.

Publication Type: Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

Visualizing spatially correlated dynamics that directs RNA conformational transitions.

Authors: Zhang Q Stelzer AC Fisher CK et al.

Source: Nature [Nature] 2007 Dec 20; Vol. 450 (7173), pp. 1263-7.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE

A high-bias, low-variance introduction to Machine Learning for physicists.

Authors: Mehta P Wang CH Day AGR et al.

Source: Physics reports [Phys Rep] 2019 May 30; Vol. 810, pp. 1-124. Date of Electronic Publication: 2019 Mar 14.

Publication Type: Journal Article

Journal Info: Publisher: North-Holland Pub. Co Country of Publication: Netherlands NLM ID: 9876465 Publication Model: Print-Electronic Cited Medium: Print ISSN: 0370-1573 (Print) Linking ISSN: 03701573 NLM ISO Abbreviation: Phys Rep Subsets: PubMed not MEDLINE

Analytically tractable model for community ecology with many species.

Authors: Dickens B Fisher CK Mehta P

Source: Physical review. E [Phys Rev E] 2016 Aug; Vol. 94 (2-1), pp. 022423. Date of Electronic Publication: 2016 Aug 30.

Publication Type: Journal Article

Journal Info: Publisher: American Physical Society Country of Publication: United States NLM ID: 101676019 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2470-0053 (Electronic) Linking ISSN: 24700045 NLM ISO Abbreviation: Phys Rev E Subsets: MEDLINE

Analyzing Ensembles of Amyloid Proteins Using Bayesian Statistics.

Authors: Gurry T Fisher CK Schmidt M et al.

Source: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2016; Vol. 1345, pp. 269-80.

Publication Type: Journal Article

Journal Info: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

Thermodynamics of statistical inference by cells.

Authors: Lang AH Fisher CK Mora T et al.

Source: Physical review letters [Phys Rev Lett] 2014 Oct 03; Vol. 113 (14), pp. 148103. Date of Electronic Publication: 2014 Oct 03.

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: American Physical Society Country of Publication: United States NLM ID: 0401141 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1079-7114 (Electronic) Linking ISSN: 00319007 NLM ISO Abbreviation: Phys Rev Lett Subsets: MEDLINE

The transition between the niche and neutral regimes in ecology.

Authors: Fisher CK Mehta P

Source: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2014 Sep 09; Vol. 111 (36), pp. 13111-6. Date of Electronic Publication: 2014 Aug 25.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc Natl Acad Sci U S A Subsets: MEDLINE

Comparative studies of disordered proteins with similar sequences: application to Aβ40 and Aβ42.

Authors: Fisher CK Ullman O Stultz CM

Source: Biophysical journal [Biophys J] 2013 Apr 02; Vol. 104 (7), pp. 1546-55.

Publication Type: Comparative Study; Journal Article

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 0370626 Publication Model: Print Cited Medium: Internet ISSN: 1542-0086 (Electronic) Linking ISSN: 00063495 NLM ISO Abbreviation: Biophys J Subsets: MEDLINE

The dynamic structure of α-synuclein multimers.

Authors: Gurry T Ullman O Fisher CK et al.

Source: Journal of the American Chemical Society [J Am Chem Soc] 2013 Mar 13; Vol. 135 (10), pp. 3865-72. Date of Electronic Publication: 2013 Feb 27.

Publication Type: Journal Article

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 7503056 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1520-5126 (Electronic) Linking ISSN: 00027863 NLM ISO Abbreviation: J Am Chem Soc Subsets: MEDLINE

Efficient construction of disordered protein ensembles in a Bayesian framework with optimal selection of conformations.

Authors: Fisher CK Ullman O Stultz CM

Source: Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing [Pac Symp Biocomput] 2012, pp. 82-93.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: World Scientific Country of Publication: United States NLM ID: 9711271 Publication Model: Print Cited Medium: Internet ISSN: 2335-6936 (Electronic) Linking ISSN: 23356928 NLM ISO Abbreviation: Pac Symp Biocomput Subsets: MEDLINE

Explaining the structural plasticity of α-synuclein.

Authors: Ullman O Fisher CK Stultz CM

Source: Journal of the American Chemical Society [J Am Chem Soc] 2011 Dec 07; Vol. 133 (48), pp. 19536-46. Date of Electronic Publication: 2011 Nov 14.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 7503056 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1520-5126 (Electronic) Linking ISSN: 00027863 NLM ISO Abbreviation: J Am Chem Soc Subsets: MEDLINE

Protein structure along the order-disorder continuum.

Authors: Fisher CK Stultz CM

Source: Journal of the American Chemical Society [J Am Chem Soc] 2011 Jul 06; Vol. 133 (26), pp. 10022-5. Date of Electronic Publication: 2011 Jun 13.

Publication Type: Journal Article; Research Support, N.I.H., Extramural

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 7503056 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1520-5126 (Electronic) Linking ISSN: 00027863 NLM ISO Abbreviation: J Am Chem Soc Subsets: MEDLINE

Constructing ensembles for intrinsically disordered proteins.

Authors: Fisher CK Stultz CM

Source: Current opinion in structural biology [Curr Opin Struct Biol] 2011 Jun; Vol. 21 (3), pp. 426-31. Date of Electronic Publication: 2011 Apr 27.

Publication Type: Journal Article; Review

Journal Info: Publisher: Elsevier Science Country of Publication: England NLM ID: 9107784 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-033X (Electronic) Linking ISSN: 0959440X NLM ISO Abbreviation: Curr Opin Struct Biol Subsets: MEDLINE