Search Results - "Nguyen TVN"

A multiscale, Bayesian inference approach to augment mechanistic models of cell signaling with machine-learning predictions of binding affinity.

Authors: Huber, Holly A. Finley, Stacey D.

Source: PLoS Computational Biology. 6/5/2026, Vol. 22 Issue 6, p1-20. 20p.

The role of advanced imaging in the diagnosis and management of scimitar syndrome in pediatric patients.

Authors: Nguyen TVN Emral HG Voges I et al.

Source: International journal of cardiology. Congenital heart disease [Int J Cardiol Congenit Heart Dis] 2026 Apr 16; Vol. 24, pp. 100678. Date of Electronic Publication: 2026 Apr 16 (Print Publication: 2026).

Publication Type: Journal Article; Review

Journal Info: Publisher: Elsevier B.V Country of Publication: Netherlands NLM ID: 9918367981006676 Publication Model: eCollection Cited Medium: Internet ISSN: 2666-6685 (Electronic) Linking ISSN: 26666685 NLM ISO Abbreviation: Int J Cardiol Congenit Heart Dis Subsets: PubMed not MEDLINE

Verification and reproducible curation of the BioModels repository.

Authors: Smith, Lucian P. Malik-Sheriff, Rahuman S. Nguyen, Tung V. N. et al.

Source: PLoS Computational Biology. 12/4/2025, Vol. 21 Issue 12, p1-18. 18p.

A standardized workflow for kinetic metabolic model curation and dissemination.

Authors: Cook, Margaret Anastasakis, Stella Heydarabadipour, Adel et al.

Source: PLoS Computational Biology. 4/20/2026, Vol. 22 Issue 4, p1-22. 22p.

Talk2Biomodels: AI agent-based open-source LLM initiative for kinetic biological models.

Authors: Wehling, Lilija Singh, Gurdeep Mulyadi, Ahmad Wisnu et al.

Source: BMC Bioinformatics. 11/18/2025, Vol. 26 Issue 1, p1-9. 9p.

Evaluating the limitations of Bayesian metabolic control analysis.

Authors: Shin, Janis Carothers, James M. Sauro, Herbert M.

Source: PLoS Computational Biology. 1/16/2026, Vol. 22 Issue 1, p1-24. 24p.

Multiscale predictive cellular modeling: integrating hypothesis grammars, digital twins, and multi-omics for In silico oncology and precision theranostics.

Authors: Gopukumar ST Dwivedi D Rahamathulla M et al.

Source: Functional & integrative genomics [Funct Integr Genomics] 2026 May 29; Vol. 26 (1). Date of Electronic Publication: 2026 May 29.

Publication Type: Journal Article; Review

Journal Info: Publisher: Springer Country of Publication: Germany NLM ID: 100939343 Publication Model: Electronic Cited Medium: Internet ISSN: 1438-7948 (Electronic) Linking ISSN: 1438793X NLM ISO Abbreviation: Funct Integr Genomics Subsets: MEDLINE

Mechanistic modeling of cell viability assays with in silico lineage tracing.

Authors: Mutsuddy, Arnab Huggins, Jonah R. Amrit, Aurore K. et al.

Source: PLoS Computational Biology. 8/29/2025, Vol. 21 Issue 8, p1-22. 22p.

Jaxkineticmodel: Neural ordinary differential equations inspired parameterization of kinetic models.

Authors: van Lent, Paul Bunkova, Olga Magyar, Bálint et al.

Source: PLoS Computational Biology. 7/7/2025, Vol. 21 Issue 7, p1-17. 17p.

Mathematical basis and toolchain for hierarchical optimization of biochemical networks.

Authors: Viswan, Nisha Ann Tribut, Alexandre Gasparyan, Manvel et al.

Source: PLoS Computational Biology. 12/2/2024, Vol. 20 Issue 12, p1-31. 31p.

SBML Level 3: an extensible format for the exchange and reuse of biological models.

Authors: Keating, Sarah M Waltemath, Dagmar König, Matthias et al.

Source: Molecular Systems Biology. Aug2020, Vol. 16 Issue 8, p1-21. 21p.

RBC-GEM: A genome-scale metabolic model for systems biology of the human red blood cell.

Authors: Haiman, Zachary B. Key, Alicia D'Alessandro, Angelo et al.

Source: PLoS Computational Biology. 3/12/2025, Vol. 21 Issue 3, p1-48. 48p.

Computational modelling identifies primary mediators of crosstalk between DNA damage and oxidative stress responses.

Authors: Burgers, Elsje J Sharma, Raju P Eugenio, Carl Joshua S et al.

Source: PLoS Computational Biology. 3/10/2025, Vol. 21 Issue 3, p1-30. 30p.

A dynamic model of COVID-19 infection quantifies the impact of preventive interventions on the infection of severely immunocompromised subjects in the United Kingdom.

Authors: Pin, Carmen Taylor, Sylvia Ferreira, Catia et al.

Source: PLoS ONE. 2/23/2026, Vol. 21 Issue 2, p1-22. 22p.

LimbNET: collaborative platform for simulating spatial patterns of gene networks in limb development.

Authors: Matyjaszkiewicz, Antoni Sharpe, James

Source: Molecular Systems Biology. Feb2026, Vol. 22 Issue 2, p228-240. 13p.

Authors: Awal, Md Rabiul Hossain, Md.Shakhawat Hossain, Md. Alamgir et al.

Source: Journal of Global Entrepreneurship Research. 1/13/2025, Vol. 15 Issue 1, p1-15. 15p.

Subject Terms: Planned behavior theory, Family support, Intention, Control (Psychology), Structural equation modeling

Geographic Terms: South Asia

Polymicrobial interactions of Helicobacter pylori and its role in the process of oral diseases.

Authors: Fan, Yufei Chen, Xi Shan, Tiantian et al.

Source: Journal of Oral Microbiology. Dec2025, Vol. 17 Issue 1, p1-16. 16p.

Making PBPK models more reproducible in practice.

Authors: Domínguez-Romero, Elena Mazurenko, Stanislav Scheringer, Martin et al.

Source: Briefings in Bioinformatics. Nov2024, Vol. 25 Issue 6, p1-13. 13p.

The first multi-tissue genome-scale metabolic model of a woody plant highlights suberin biosynthesis pathways in Quercus suber.

Authors: Cunha, Emanuel Silva, Miguel Chaves, Inês et al.

Source: PLoS Computational Biology. 9/20/2023, Vol. 19 Issue 9, p1-27. 27p. 3 Diagrams, 4 Charts, 1 Graph.

Reproducibility in systems biology modelling.

Authors: Tiwari, Krishna Kananathan, Sarubini Roberts, Matthew G et al.

Source: Molecular Systems Biology. Feb2021, Vol. 17 Issue 2, p1-7. 7p.