Search Results - "Nunn BL"

Carafe enables high quality in silico spectral library generation for data-independent acquisition proteomics.

Authors: Wen B Hsu C Shteynberg D et al.

Source: Nature communications [Nat Commun] 2025 Nov 06; Vol. 16 (1), pp. 9815. Date of Electronic Publication: 2025 Nov 06.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

An In-Depth Coho Salmon (Oncorhynchus kisutch) Ovarian Follicle Proteome Reveals Coordinated Changes Across Diverse Cellular Processes during the Transition From Primary to Secondary Growth.

Authors: Timmins-Schiffman E Telish J Field C et al.

Source: Proteomics [Proteomics] 2025 Mar; Vol. 25 (5-6), pp. e202400311. Date of Electronic Publication: 2024 Dec 08.

Publication Type: Journal Article

Journal Info: Publisher: Wiley-VCH Country of Publication: Germany NLM ID: 101092707 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1615-9861 (Electronic) Linking ISSN: 16159853 NLM ISO Abbreviation: Proteomics Subsets: MEDLINE

Author Correction: Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days.

Authors: Nunn BL Timmins-Schiffman E Mudge MC et al.

Source: Scientific data [Sci Data] 2025 Jan 20; Vol. 12 (1), pp. 113. Date of Electronic Publication: 2025 Jan 20.

Publication Type: Published Erratum

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101640192 Publication Model: Electronic Cited Medium: Internet ISSN: 2052-4463 (Electronic) Linking ISSN: 20524463 NLM ISO Abbreviation: Sci Data Subsets: MEDLINE; PubMed not MEDLINE

Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days.

Authors: Nunn BL Timmins-Schiffman E Mudge MC et al.

Source: Scientific data [Sci Data] 2024 Nov 22; Vol. 11 (1), pp. 1270. Date of Electronic Publication: 2024 Nov 22.

Publication Type: Dataset; Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101640192 Publication Model: Electronic Cited Medium: Internet ISSN: 2052-4463 (Electronic) Linking ISSN: 20524463 NLM ISO Abbreviation: Sci Data Subsets: MEDLINE

Mechanisms underlying thermally induced growth plasticity in juvenile Pacific halibut.

Authors: Planas JV Jasonowicz AJ Simeon A et al.

Source: The Journal of experimental biology [J Exp Biol] 2025 Oct 01; Vol. 228 (19). Date of Electronic Publication: 2025 Oct 06.

Publication Type: Journal Article

Journal Info: Publisher: Company Of Biologists Limited Country of Publication: England NLM ID: 0243705 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1477-9145 (Electronic) Linking ISSN: 00220949 NLM ISO Abbreviation: J Exp Biol Subsets: MEDLINE

Carafe enables high quality in silico spectral library generation for data-independent acquisition proteomics.

Authors: Wen B Hsu C Shteynberg D et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2025 Aug 04. Date of Electronic Publication: 2025 Aug 04.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Harmful algal blooms are preceded by a predictable and quantifiable shift in the oceanic microbiome.

Authors: Mudge MC Riffle M Chebli G et al.

Source: Nature communications [Nat Commun] 2025 Apr 29; Vol. 16 (1), pp. 3986. Date of Electronic Publication: 2025 Apr 29.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

Proteomic Plasticity in the Coral Montipora capitata Gamete Bundles after Parent Thermal Bleaching.

Authors: Timmins-Schiffman EB Khanna R Brown T et al.

Source: Journal of proteome research [J Proteome Res] 2025 Mar 07; Vol. 24 (3), pp. 1317-1328. Date of Electronic Publication: 2025 Feb 25.

Publication Type: Journal Article

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101128775 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-3907 (Electronic) Linking ISSN: 15353893 NLM ISO Abbreviation: J Proteome Res Subsets: MEDLINE

Proteomic Insights into Psychrophile Growth in Perchlorate-Amended Subzero Conditions: Implications for Martian Life Detection.

Authors: Gentilhomme AS Dhakar K Timmins-Schiffman E et al.

Source: Astrobiology [Astrobiology] 2025 Mar; Vol. 25 (3), pp. 177-188. Date of Electronic Publication: 2025 Feb 17.

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 101088083 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1557-8070 (Electronic) Linking ISSN: 15578070 NLM ISO Abbreviation: Astrobiology Subsets: MEDLINE

Metabolic Responses, Cell Recoverability, and Protein Signatures of Three Extremophiles: Sustained Life During Long-Term Subzero Incubations.

Authors: Ewert M Nunn BL Firth E et al.

Source: Microorganisms [Microorganisms] 2025 Jan 24; Vol. 13 (2). Date of Electronic Publication: 2025 Jan 24.

Publication Type: Journal Article

Journal Info: Publisher: MDPI AG Country of Publication: Switzerland NLM ID: 101625893 Publication Model: Electronic Cited Medium: Print ISSN: 2076-2607 (Print) Linking ISSN: 20762607 NLM ISO Abbreviation: Microorganisms Subsets: PubMed not MEDLINE

Hydrocarbon metabolism and petroleum seepage as ecological and evolutionary drivers for Cycloclasticus.

Authors: Arrington EC Tarn J Kivenson V et al.

Source: The ISME journal [ISME J] 2025 Jan 02; Vol. 19 (1).

Publication Type: Journal Article

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101301086 Publication Model: Print Cited Medium: Internet ISSN: 1751-7370 (Electronic) Linking ISSN: 17517362 NLM ISO Abbreviation: ISME J Subsets: MEDLINE

Reproductive resilience: pathways to gametogenic success in Montipora capitata after bleaching.

Authors: Timmins-Schiffman E Duselis E Brown T et al.

Source: Scientific reports [Sci Rep] 2024 Nov 13; Vol. 14 (1), pp. 27765. Date of Electronic Publication: 2024 Nov 13.

Publication Type: Journal Article

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

Time course transcriptomic profiling suggests Crp/Fnr transcriptional regulation of nosZ gene in a N2O-reducing thermophile.

Authors: Tsuchiya J Mino S Fujiwara F et al.

Source: IScience [iScience] 2024 Sep 30; Vol. 27 (11), pp. 111074. Date of Electronic Publication: 2024 Sep 30 (Print Publication: 2024).

Publication Type: Journal Article

Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101724038 Publication Model: eCollection Cited Medium: Internet ISSN: 2589-0042 (Electronic) Linking ISSN: 25890042 NLM ISO Abbreviation: iScience Subsets: PubMed not MEDLINE

Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days.

Authors: Nunn BL Timmins-Schiffman E Mudge MC et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2024 Sep 28. Date of Electronic Publication: 2024 Sep 28.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Removal of Exogenous Stimuli Reveals a Canalization of Circadian Physiology in a Vertically Migrating Copepod.

Authors: Timmins-Schiffman E Maas AE Khanna R et al.

Source: Journal of proteome research [J Proteome Res] 2024 Jun 07; Vol. 23 (6), pp. 2112-2123. Date of Electronic Publication: 2024 May 01.

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, Non-U.S. Gov't

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101128775 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-3907 (Electronic) Linking ISSN: 15353893 NLM ISO Abbreviation: J Proteome Res Subsets: MEDLINE

Diel metabolic patterns revealed by in situ transcriptome and proteome in a vertically migratory copepod.

Authors: Maas AE Timmins-Schiffman E Tarrant AM et al.

Source: Molecular ecology [Mol Ecol] 2024 Mar; Vol. 33 (6), pp. e17284. Date of Electronic Publication: 2024 Jan 22.

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Blackwell Scientific Publications Country of Publication: England NLM ID: 9214478 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1365-294X (Electronic) Linking ISSN: 09621083 NLM ISO Abbreviation: Mol Ecol Subsets: MEDLINE

Survey of metaproteomics software tools for functional microbiome analysis.

Authors: Sajulga R Easterly C Riffle M et al.

Source: PloS one [PLoS One] 2020 Nov 10; Vol. 15 (11), pp. e0241503. Date of Electronic Publication: 2020 Nov 10 (Print Publication: 2020).

Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Subcellular proteomics for determining iron-limited remodeling of plastids in the model diatom Thalassiosira pseudonana (Bacillariophyta).

Authors: Gomes KM Nunn BL Chappell PD et al.

Source: Journal of phycology [J Phycol] 2023 Oct; Vol. 59 (5), pp. 1085-1099. Date of Electronic Publication: 2023 Aug 24.

Publication Type: Journal Article

Journal Info: Publisher: Wiley Periodicals Inc Country of Publication: United States NLM ID: 9882935 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1529-8817 (Electronic) Linking ISSN: 00223646 NLM ISO Abbreviation: J Phycol Subsets: MEDLINE

Growth phase proteomics of the heterotrophic marine bacterium Ruegeria pomeroyi.

Authors: Krayushkina D Timmins-Schiffman E Faux J et al.

Source: Scientific data [Sci Data] 2019 Dec 03; Vol. 6 (1), pp. 303. Date of Electronic Publication: 2019 Dec 03.

Publication Type: Dataset; Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101640192 Publication Model: Electronic Cited Medium: Internet ISSN: 2052-4463 (Electronic) Linking ISSN: 20524463 NLM ISO Abbreviation: Sci Data Subsets: MEDLINE

Detection of Short Peptides as Putative Biosignatures of Psychrophiles via Laser Desorption Mass Spectrometry.

Authors: Ni Z Arevalo R Jr Bardyn A et al.

Source: Astrobiology [Astrobiology] 2023 Jun; Vol. 23 (6), pp. 657-669. Date of Electronic Publication: 2023 May 03.

Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.

Journal Info: Publisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 101088083 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1557-8070 (Electronic) Linking ISSN: 15578070 NLM ISO Abbreviation: Astrobiology Subsets: MEDLINE