Search Results - "Panse C"

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Paleo-proteomic analysis of Iron Age dental calculus provides direct evidence of Scythian reliance on ruminant dairy.

Authors: Pecnik J Ventresca Miller AR Panse C et al.

Source: PloS one [PLoS One] 2026 Jan 21; Vol. 21 (1), pp. e0339464. Date of Electronic Publication: 2026 Jan 21 (Print Publication: 2026).

Publication Type: Journal Article; Historical Article

Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

Koina: Democratizing machine learning for proteomics research.

Authors: Lautenbacher L Yang KL Kockmann T et al.

Source: Nature communications [Nat Commun] 2025 Nov 11; Vol. 16 (1), pp. 9933. Date of Electronic Publication: 2025 Nov 11.

Publication Type: Journal Article

Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

International symposium on integrative bioinformatics 2024 - editorial.

Authors: Türker C Panse C Sommer B et al.

Source: Journal of integrative bioinformatics [J Integr Bioinform] 2024 Nov 07; Vol. 21 (3). Date of Electronic Publication: 2024 Nov 07 (Print Publication: 2024).

Publication Type: Editorial; Introductory Journal Article

Journal Info: Publisher: De Gruyter Open Country of Publication: Germany NLM ID: 101503361 Publication Model: eCollection Cited Medium: Internet ISSN: 1613-4516 (Electronic) Linking ISSN: 16134516 NLM ISO Abbreviation: J Integr Bioinform Subsets: MEDLINE

A combination of phenotypic responses and genetic adaptations enables Staphylococcus aureus to withstand inhibitory molecules secreted by Pseudomonas aeruginosa.

Authors: Schwyter L Niggli S Zajac N et al.

Source: MSystems [mSystems] 2025 Aug 19; Vol. 10 (8), pp. e0026225. Date of Electronic Publication: 2025 Jul 31.

Publication Type: Journal Article

Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101680636 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2379-5077 (Electronic) Linking ISSN: 23795077 NLM ISO Abbreviation: mSystems Subsets: MEDLINE

prolfquapp ─ A User-Friendly Command-Line Tool Simplifying Differential Expression Analysis in Quantitative Proteomics.

Authors: Wolski WE Grossmann J Schwarz L et al.

Source: Journal of proteome research [J Proteome Res] 2025 Feb 07; Vol. 24 (2), pp. 955-965. Date of Electronic Publication: 2025 Jan 23.

Publication Type: Journal Article

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101128775 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-3907 (Electronic) Linking ISSN: 15353893 NLM ISO Abbreviation: J Proteome Res Subsets: MEDLINE

A Multiyear Longitudinal Harmonization Study of Quality Controls in Mass Spectrometry Proteomics Core Facilities.

Authors: Chiva C Olivella R Staes A et al.

Source: Journal of proteome research [J Proteome Res] 2025 Feb 07; Vol. 24 (2), pp. 397-409. Date of Electronic Publication: 2025 Jan 01.

Publication Type: Journal Article

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101128775 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-3907 (Electronic) Linking ISSN: 15353893 NLM ISO Abbreviation: J Proteome Res Subsets: MEDLINE

Bridging data management platforms and visualization tools to enable ad-hoc and smart analytics in life sciences.

Authors: Panse C Trachsel C Türker C

Source: Journal of integrative bioinformatics [J Integr Bioinform] 2022 Sep 08; Vol. 19 (4). Date of Electronic Publication: 2022 Sep 08 (Print Publication: 2022).

Publication Type: Journal Article

Journal Info: Publisher: De Gruyter Open Country of Publication: Germany NLM ID: 101503361 Publication Model: eCollection Cited Medium: Internet ISSN: 1613-4516 (Electronic) Linking ISSN: 16134516 NLM ISO Abbreviation: J Integr Bioinform Subsets: MEDLINE

Proceedings of the EuBIC-MS developers meeting 2023.

Authors: Beltrao P Van Den Bossche T Gabriels R et al.

Source: Journal of proteomics [J Proteomics] 2024 Aug 15; Vol. 305, pp. 105246. Date of Electronic Publication: 2024 Jul 02.

Publication Type: Conference Proceedings; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 101475056 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1876-7737 (Electronic) Linking ISSN: 18743919 NLM ISO Abbreviation: J Proteomics Subsets: MEDLINE

Koina: Democratizing machine learning for proteomics research.

Authors: Lautenbacher L Yang KL Kockmann T et al.

Source: BioRxiv : the preprint server for biology [bioRxiv] 2024 Jun 03. Date of Electronic Publication: 2024 Jun 03.

Publication Type: Journal Article; Preprint

Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

Developmental stage-specific proteome analysis of the legume pod borer Maruca vitrata provides insights on relevant proteins.

Authors: Chatterjee M Roschitzki B Grossmann J et al.

Source: International journal of biological macromolecules [Int J Biol Macromol] 2024 Jan; Vol. 254 (Pt 1), pp. 127666. Date of Electronic Publication: 2023 Oct 25.

Publication Type: Journal Article

Journal Info: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 7909578 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-0003 (Electronic) Linking ISSN: 01418130 NLM ISO Abbreviation: Int J Biol Macromol Subsets: MEDLINE

Quality standards in proteomics research facilities: Common standards and quality procedures are essential for proteomics facilities and their users.

Authors: Chiva C Mendes Maia T Panse C et al.

Source: EMBO reports [EMBO Rep] 2021 Jun 04; Vol. 22 (6), pp. e52626. Date of Electronic Publication: 2021 May 19.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 100963049 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1469-3178 (Electronic) Linking ISSN: 1469221X NLM ISO Abbreviation: EMBO Rep Subsets: MEDLINE

Ultraviolet Photodissociation for Non-Target Screening-Based Identification of Organic Micro-Pollutants in Water Samples.

Authors: Panse C Sharma S Huguet R et al.

Source: Molecules (Basel, Switzerland) [Molecules] 2020 Sep 12; Vol. 25 (18). Date of Electronic Publication: 2020 Sep 12.

Publication Type: Journal Article

Journal Info: Publisher: MDPI Country of Publication: Switzerland NLM ID: 100964009 Publication Model: Electronic Cited Medium: Internet ISSN: 1420-3049 (Electronic) Linking ISSN: 14203049 NLM ISO Abbreviation: Molecules Subsets: MEDLINE

Unraveling the proteomic changes involved in the resistance response of Cajanus platycarpus to herbivory by Helicoverpa armigera.

Authors: Rathinam M Roschitzki B Grossmann J et al.

Source: Applied microbiology and biotechnology [Appl Microbiol Biotechnol] 2020 Sep; Vol. 104 (17), pp. 7603-7618. Date of Electronic Publication: 2020 Jul 20.

Publication Type: Journal Article

Journal Info: Publisher: Springer International Country of Publication: Germany NLM ID: 8406612 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-0614 (Electronic) Linking ISSN: 01757598 NLM ISO Abbreviation: Appl Microbiol Biotechnol Subsets: MEDLINE

prolfqua: A Comprehensive R-Package for Proteomics Differential Expression Analysis.

Authors: Wolski WE Nanni P Grossmann J et al.

Source: Journal of proteome research [J Proteome Res] 2023 Apr 07; Vol. 22 (4), pp. 1092-1104. Date of Electronic Publication: 2023 Mar 20.

Publication Type: Journal Article

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101128775 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-3907 (Electronic) Linking ISSN: 15353893 NLM ISO Abbreviation: J Proteome Res Subsets: MEDLINE

In search of cerebrospinal fluid biomarkers of fatigue in multiple sclerosis: A proteomics study.

Authors: Valko PO Roschitzki B Faigle W et al.

Source: Journal of sleep research [J Sleep Res] 2019 Jun; Vol. 28 (3), pp. e12721. Date of Electronic Publication: 2018 Jul 01.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Published on behalf of the European Sleep Research Society by Blackwell Scientific Publications Country of Publication: England NLM ID: 9214441 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1365-2869 (Electronic) Linking ISSN: 09621105 NLM ISO Abbreviation: J Sleep Res Subsets: MEDLINE

Targeted proteomics coming of age - SRM, PRM and DIA performance evaluated from a core facility perspective.

Authors: Kockmann T Trachsel C Panse C et al.

Source: Proteomics [Proteomics] 2016 Aug; Vol. 16 (15-16), pp. 2183-92. Date of Electronic Publication: 2016 Jun 08.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Wiley-VCH Country of Publication: Germany NLM ID: 101092707 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1615-9861 (Electronic) Linking ISSN: 16159853 NLM ISO Abbreviation: Proteomics Subsets: MEDLINE

specL--an R/Bioconductor package to prepare peptide spectrum matches for use in targeted proteomics.

Authors: Panse C Trachsel C Grossmann J et al.

Source: Bioinformatics (Oxford, England) [Bioinformatics] 2015 Jul 01; Vol. 31 (13), pp. 2228-31. Date of Electronic Publication: 2015 Feb 23.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

Universal Spectrum Explorer: A Standalone (Web-)Application for Cross-Resource Spectrum Comparison.

Authors: Schmidt T Samaras P Dorfer V et al.

Source: Journal of proteome research [J Proteome Res] 2021 Jun 04; Vol. 20 (6), pp. 3388-3394. Date of Electronic Publication: 2021 May 10.

Publication Type: Journal Article; Research Support, Non-U.S. Gov't

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101128775 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-3907 (Electronic) Linking ISSN: 15353893 NLM ISO Abbreviation: J Proteome Res Subsets: MEDLINE

The rawrr R Package: Direct Access to Orbitrap Data and Beyond.

Authors: Kockmann T Panse C

Source: Journal of proteome research [J Proteome Res] 2021 Apr 02; Vol. 20 (4), pp. 2028-2034. Date of Electronic Publication: 2021 Mar 09.

Publication Type: Journal Article

Journal Info: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101128775 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-3907 (Electronic) Linking ISSN: 15353893 NLM ISO Abbreviation: J Proteome Res Subsets: MEDLINE