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Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome.

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Title: Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome.
Authors: Wenger AM; Pacific Biosciences, Menlo Park, CA, USA., Peluso P; Pacific Biosciences, Menlo Park, CA, USA., Rowell WJ; Pacific Biosciences, Menlo Park, CA, USA., Chang PC; Google Inc., Mountain View, CA, USA., Hall RJ; Pacific Biosciences, Menlo Park, CA, USA., Concepcion GT; Pacific Biosciences, Menlo Park, CA, USA., Ebler J; Center for Bioinformatics, Saarland University, Saarbrücken, Germany.; Max Planck Institute for Informatics, Saarbrücken, Germany.; Graduate School of Computer Science, Saarland University, Saarbrücken, Germany., Fungtammasan A; DNAnexus, Mountain View, CA, USA., Kolesnikov A; Google Inc., Mountain View, CA, USA., Olson ND; National Institute of Standards and Technology, Gaithersburg, MD, USA., Töpfer A; Pacific Biosciences, Menlo Park, CA, USA., Alonge M; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA., Mahmoud M; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA., Qian Y; Pacific Biosciences, Menlo Park, CA, USA., Chin CS; DNAnexus, Mountain View, CA, USA., Phillippy AM; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA., Schatz MC; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA., Myers G; Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany., DePristo MA; Google Inc., Mountain View, CA, USA., Ruan J; Agricultural Genomics Institute, Chinese Academy of Agricultural Sciences, Shenzhen, China., Marschall T; Center for Bioinformatics, Saarland University, Saarbrücken, Germany.; Max Planck Institute for Informatics, Saarbrücken, Germany., Sedlazeck FJ; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA., Zook JM; National Institute of Standards and Technology, Gaithersburg, MD, USA., Li H; Dana-Farber Cancer Institute, Boston, MA, USA., Koren S; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA., Carroll A; Google Inc., Mountain View, CA, USA., Rank DR; Pacific Biosciences, Menlo Park, CA, USA. drank@pacb.com., Hunkapiller MW; Pacific Biosciences, Menlo Park, CA, USA. mhunkapiller@pacb.com.
Source: Nature biotechnology [Nat Biotechnol] 2019 Oct; Vol. 37 (10), pp. 1155-1162. Date of Electronic Publication: 2019 Aug 12.
Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
Journal Info: Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE
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  Data: <searchLink fieldCode="AU" term="%22Wenger+AM%22">Wenger AM</searchLink>; Pacific Biosciences, Menlo Park, CA, USA.<br /><searchLink fieldCode="AU" term="%22Peluso+P%22">Peluso P</searchLink>; Pacific Biosciences, Menlo Park, CA, USA.<br /><searchLink fieldCode="AU" term="%22Rowell+WJ%22">Rowell WJ</searchLink>; Pacific Biosciences, Menlo Park, CA, USA.<br /><searchLink fieldCode="AU" term="%22Chang+PC%22">Chang PC</searchLink>; Google Inc., Mountain View, CA, USA.<br /><searchLink fieldCode="AU" term="%22Hall+RJ%22">Hall RJ</searchLink>; Pacific Biosciences, Menlo Park, CA, USA.<br /><searchLink fieldCode="AU" term="%22Concepcion+GT%22">Concepcion GT</searchLink>; Pacific Biosciences, Menlo Park, CA, USA.<br /><searchLink fieldCode="AU" term="%22Ebler+J%22">Ebler J</searchLink>; Center for Bioinformatics, Saarland University, Saarbrücken, Germany.; Max Planck Institute for Informatics, Saarbrücken, Germany.; Graduate School of Computer Science, Saarland University, Saarbrücken, Germany.<br /><searchLink fieldCode="AU" term="%22Fungtammasan+A%22">Fungtammasan A</searchLink>; DNAnexus, Mountain View, CA, USA.<br /><searchLink fieldCode="AU" term="%22Kolesnikov+A%22">Kolesnikov A</searchLink>; Google Inc., Mountain View, CA, USA.<br /><searchLink fieldCode="AU" term="%22Olson+ND%22">Olson ND</searchLink>; National Institute of Standards and Technology, Gaithersburg, MD, USA.<br /><searchLink fieldCode="AU" term="%22Töpfer+A%22">Töpfer A</searchLink>; Pacific Biosciences, Menlo Park, CA, USA.<br /><searchLink fieldCode="AU" term="%22Alonge+M%22">Alonge M</searchLink>; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.<br /><searchLink fieldCode="AU" term="%22Mahmoud+M%22">Mahmoud M</searchLink>; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.<br /><searchLink fieldCode="AU" term="%22Qian+Y%22">Qian Y</searchLink>; Pacific Biosciences, Menlo Park, CA, USA.<br /><searchLink fieldCode="AU" term="%22Chin+CS%22">Chin CS</searchLink>; DNAnexus, Mountain View, CA, USA.<br /><searchLink fieldCode="AU" term="%22Phillippy+AM%22">Phillippy AM</searchLink>; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA.<br /><searchLink fieldCode="AU" term="%22Schatz+MC%22">Schatz MC</searchLink>; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.<br /><searchLink fieldCode="AU" term="%22Myers+G%22">Myers G</searchLink>; Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.<br /><searchLink fieldCode="AU" term="%22DePristo+MA%22">DePristo MA</searchLink>; Google Inc., Mountain View, CA, USA.<br /><searchLink fieldCode="AU" term="%22Ruan+J%22">Ruan J</searchLink>; Agricultural Genomics Institute, Chinese Academy of Agricultural Sciences, Shenzhen, China.<br /><searchLink fieldCode="AU" term="%22Marschall+T%22">Marschall T</searchLink>; Center for Bioinformatics, Saarland University, Saarbrücken, Germany.; Max Planck Institute for Informatics, Saarbrücken, Germany.<br /><searchLink fieldCode="AU" term="%22Sedlazeck+FJ%22">Sedlazeck FJ</searchLink>; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.<br /><searchLink fieldCode="AU" term="%22Zook+JM%22">Zook JM</searchLink>; National Institute of Standards and Technology, Gaithersburg, MD, USA.<br /><searchLink fieldCode="AU" term="%22Li+H%22">Li H</searchLink>; Dana-Farber Cancer Institute, Boston, MA, USA.<br /><searchLink fieldCode="AU" term="%22Koren+S%22">Koren S</searchLink>; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA.<br /><searchLink fieldCode="AU" term="%22Carroll+A%22">Carroll A</searchLink>; Google Inc., Mountain View, CA, USA.<br /><searchLink fieldCode="AU" term="%22Rank+DR%22">Rank DR</searchLink>; Pacific Biosciences, Menlo Park, CA, USA. drank@pacb.com.<br /><searchLink fieldCode="AU" term="%22Hunkapiller+MW%22">Hunkapiller MW</searchLink>; Pacific Biosciences, Menlo Park, CA, USA. mhunkapiller@pacb.com.
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  Data: <searchLink fieldCode="JN" term="%229604648%22">Nature biotechnology</searchLink> [Nat Biotechnol] 2019 Oct; Vol. 37 (10), pp. 1155-1162. <i>Date of Electronic Publication: </i>2019 Aug 12.
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