View in EDS PDF Full Text

Development of a time-series shotgun metagenomics database for monitoring microbial communities at the Pacific coast of Japan.

Saved in:
Bibliographic Details
Title: Development of a time-series shotgun metagenomics database for monitoring microbial communities at the Pacific coast of Japan.
Authors: Yoshitake K; Laboratory of Aquatic Molecular Biology and Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo, Tokyo, Japan.; Japan Software Management Co., Ltd., Kinko-cho, Yokohama, Kanagawa, Japan., Kimura G; Japan Software Management Co., Ltd., Kinko-cho, Yokohama, Kanagawa, Japan., Sakami T; Japan Fisheries Research and Education Agency, Shinurashima, Kanagawa, Yokohama, Kanagawa, Japan., Watanabe T; Japan Fisheries Research and Education Agency, Shinurashima, Kanagawa, Yokohama, Kanagawa, Japan., Taniuchi Y; Japan Fisheries Research and Education Agency, Shinurashima, Kanagawa, Yokohama, Kanagawa, Japan., Kakehi S; Japan Fisheries Research and Education Agency, Shinurashima, Kanagawa, Yokohama, Kanagawa, Japan., Kuwata A; Japan Fisheries Research and Education Agency, Shinurashima, Kanagawa, Yokohama, Kanagawa, Japan., Yamaguchi H; Biodiversity Division, National Institute for Environmental Studies, 16-2 Onogawa, Tsukuba, Ibaraki, Japan., Kataoka T; Faculty of Marine Science and Technology, Fukui Prefectural University, 1-1 Gakuen-cho, Obama, Fukui, Japan., Kawachi M; Biodiversity Division, National Institute for Environmental Studies, 16-2 Onogawa, Tsukuba, Ibaraki, Japan., Ikeo K; Department of Genetics, SOKENDAI, Mishima, Japan.; National Institute of Genetics, Mishima, Japan., Tan E; Laboratory of Aquatic Molecular Biology and Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo, Tokyo, Japan., Igarashi Y; Laboratory of Aquatic Molecular Biology and Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo, Tokyo, Japan., Ohtsubo M; Preeminent Medical Photonics Education & Research Center, Hamamatsu University School of Medicine, 1-20-1 Handayama, Higashi-ku, Hamamatsu, Shizuoka, Japan., Watabe S; School of Marine Biosciences, Kitasato University, Sagamihara, Kanagawa, Japan., Suzuki Y; Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan., Asakawa S; Laboratory of Aquatic Molecular Biology and Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo, Tokyo, Japan., Ishino S; Department of Bioscience and Biotechnology, Graduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, Fukuoka, Japan., Tashiro K; Department of Bioscience and Biotechnology, Graduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, Fukuoka, Japan., Ishino Y; Department of Bioscience and Biotechnology, Graduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, Fukuoka, Japan., Kobayashi T; Japan Fisheries Research and Education Agency, Shinurashima, Kanagawa, Yokohama, Kanagawa, Japan.; School of Marine Biosciences, Kitasato University, Sagamihara, Kanagawa, Japan., Mineta K; Computational Bioscience Research Center, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia., Gojobori T; Computational Bioscience Research Center, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia. takashi.gojobori@kaust.edu.sa.
Source: Scientific reports [Sci Rep] 2021 Jun 09; Vol. 11 (1), pp. 12222. Date of Electronic Publication: 2021 Jun 09.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE
Database: MEDLINE Ultimate
FullText Links:
  – Type: pdflink
Text:
  Availability: 0
Header DbId: mdl
DbLabel: MEDLINE Ultimate
An: 34108585
AccessLevel: 2
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
IllustrationInfo
Items – Name: Title
  Label: Title
  Group: Ti
  Data: Development of a time-series shotgun metagenomics database for monitoring microbial communities at the Pacific coast of Japan.
– Name: Author
  Label: Authors
  Group: Au
  Data: <searchLink fieldCode="AU" term="%22Yoshitake+K%22">Yoshitake K</searchLink>; Laboratory of Aquatic Molecular Biology and Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo, Tokyo, Japan.; Japan Software Management Co., Ltd., Kinko-cho, Yokohama, Kanagawa, Japan.<br /><searchLink fieldCode="AU" term="%22Kimura+G%22">Kimura G</searchLink>; Japan Software Management Co., Ltd., Kinko-cho, Yokohama, Kanagawa, Japan.<br /><searchLink fieldCode="AU" term="%22Sakami+T%22">Sakami T</searchLink>; Japan Fisheries Research and Education Agency, Shinurashima, Kanagawa, Yokohama, Kanagawa, Japan.<br /><searchLink fieldCode="AU" term="%22Watanabe+T%22">Watanabe T</searchLink>; Japan Fisheries Research and Education Agency, Shinurashima, Kanagawa, Yokohama, Kanagawa, Japan.<br /><searchLink fieldCode="AU" term="%22Taniuchi+Y%22">Taniuchi Y</searchLink>; Japan Fisheries Research and Education Agency, Shinurashima, Kanagawa, Yokohama, Kanagawa, Japan.<br /><searchLink fieldCode="AU" term="%22Kakehi+S%22">Kakehi S</searchLink>; Japan Fisheries Research and Education Agency, Shinurashima, Kanagawa, Yokohama, Kanagawa, Japan.<br /><searchLink fieldCode="AU" term="%22Kuwata+A%22">Kuwata A</searchLink>; Japan Fisheries Research and Education Agency, Shinurashima, Kanagawa, Yokohama, Kanagawa, Japan.<br /><searchLink fieldCode="AU" term="%22Yamaguchi+H%22">Yamaguchi H</searchLink>; Biodiversity Division, National Institute for Environmental Studies, 16-2 Onogawa, Tsukuba, Ibaraki, Japan.<br /><searchLink fieldCode="AU" term="%22Kataoka+T%22">Kataoka T</searchLink>; Faculty of Marine Science and Technology, Fukui Prefectural University, 1-1 Gakuen-cho, Obama, Fukui, Japan.<br /><searchLink fieldCode="AU" term="%22Kawachi+M%22">Kawachi M</searchLink>; Biodiversity Division, National Institute for Environmental Studies, 16-2 Onogawa, Tsukuba, Ibaraki, Japan.<br /><searchLink fieldCode="AU" term="%22Ikeo+K%22">Ikeo K</searchLink>; Department of Genetics, SOKENDAI, Mishima, Japan.; National Institute of Genetics, Mishima, Japan.<br /><searchLink fieldCode="AU" term="%22Tan+E%22">Tan E</searchLink>; Laboratory of Aquatic Molecular Biology and Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo, Tokyo, Japan.<br /><searchLink fieldCode="AU" term="%22Igarashi+Y%22">Igarashi Y</searchLink>; Laboratory of Aquatic Molecular Biology and Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo, Tokyo, Japan.<br /><searchLink fieldCode="AU" term="%22Ohtsubo+M%22">Ohtsubo M</searchLink>; Preeminent Medical Photonics Education & Research Center, Hamamatsu University School of Medicine, 1-20-1 Handayama, Higashi-ku, Hamamatsu, Shizuoka, Japan.<br /><searchLink fieldCode="AU" term="%22Watabe+S%22">Watabe S</searchLink>; School of Marine Biosciences, Kitasato University, Sagamihara, Kanagawa, Japan.<br /><searchLink fieldCode="AU" term="%22Suzuki+Y%22">Suzuki Y</searchLink>; Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan.<br /><searchLink fieldCode="AU" term="%22Asakawa+S%22">Asakawa S</searchLink>; Laboratory of Aquatic Molecular Biology and Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo, Tokyo, Japan.<br /><searchLink fieldCode="AU" term="%22Ishino+S%22">Ishino S</searchLink>; Department of Bioscience and Biotechnology, Graduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, Fukuoka, Japan.<br /><searchLink fieldCode="AU" term="%22Tashiro+K%22">Tashiro K</searchLink>; Department of Bioscience and Biotechnology, Graduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, Fukuoka, Japan.<br /><searchLink fieldCode="AU" term="%22Ishino+Y%22">Ishino Y</searchLink>; Department of Bioscience and Biotechnology, Graduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, Fukuoka, Japan.<br /><searchLink fieldCode="AU" term="%22Kobayashi+T%22">Kobayashi T</searchLink>; Japan Fisheries Research and Education Agency, Shinurashima, Kanagawa, Yokohama, Kanagawa, Japan.; School of Marine Biosciences, Kitasato University, Sagamihara, Kanagawa, Japan.<br /><searchLink fieldCode="AU" term="%22Mineta+K%22">Mineta K</searchLink>; Computational Bioscience Research Center, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.<br /><searchLink fieldCode="AU" term="%22Gojobori+T%22">Gojobori T</searchLink>; Computational Bioscience Research Center, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia. takashi.gojobori@kaust.edu.sa.
– Name: TitleSource
  Label: Source
  Group: Src
  Data: <searchLink fieldCode="JN" term="%22101563288%22">Scientific reports</searchLink> [Sci Rep] 2021 Jun 09; Vol. 11 (1), pp. 12222. <i>Date of Electronic Publication: </i>2021 Jun 09.
– Name: TypePub
  Label: Publication Type
  Group: TypPub
  Data: Journal Article; Research Support, Non-U.S. Gov't
– Name: TitleSource
  Label: Journal Info
  Group: Src
  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Nature+Publishing+Group%22">Nature Publishing Group </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101563288 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>2045-2322 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2220452322%22">20452322 </searchLink><i>NLM ISO Abbreviation: </i>Sci Rep <i>Subsets: </i>MEDLINE
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=34108585
RecordInfo BibRecord:
  BibEntity:
    Identifiers:
      – Type: doi
        Value: 10.1038/s41598-021-91615-3
    Languages:
      – Code: eng
        Text: English
    PhysicalDescription:
      Pagination:
        StartPage: 12222
    Titles:
      – TitleFull: Development of a time-series shotgun metagenomics database for monitoring microbial communities at the Pacific coast of Japan.
        Type: main
  BibRelationships:
    HasContributorRelationships:
      – PersonEntity:
          Name:
            NameFull: Yoshitake K
      – PersonEntity:
          Name:
            NameFull: Kimura G
      – PersonEntity:
          Name:
            NameFull: Sakami T
      – PersonEntity:
          Name:
            NameFull: Watanabe T
      – PersonEntity:
          Name:
            NameFull: Taniuchi Y
      – PersonEntity:
          Name:
            NameFull: Kakehi S
      – PersonEntity:
          Name:
            NameFull: Kuwata A
      – PersonEntity:
          Name:
            NameFull: Yamaguchi H
      – PersonEntity:
          Name:
            NameFull: Kataoka T
      – PersonEntity:
          Name:
            NameFull: Kawachi M
      – PersonEntity:
          Name:
            NameFull: Ikeo K
      – PersonEntity:
          Name:
            NameFull: Tan E
      – PersonEntity:
          Name:
            NameFull: Igarashi Y
      – PersonEntity:
          Name:
            NameFull: Ohtsubo M
      – PersonEntity:
          Name:
            NameFull: Watabe S
      – PersonEntity:
          Name:
            NameFull: Suzuki Y
      – PersonEntity:
          Name:
            NameFull: Asakawa S
      – PersonEntity:
          Name:
            NameFull: Ishino S
      – PersonEntity:
          Name:
            NameFull: Tashiro K
      – PersonEntity:
          Name:
            NameFull: Ishino Y
      – PersonEntity:
          Name:
            NameFull: Kobayashi T
      – PersonEntity:
          Name:
            NameFull: Mineta K
      – PersonEntity:
          Name:
            NameFull: Gojobori T
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 09
              M: 06
              Text: 2021 Jun 09
              Type: published
              Y: 2021
          Identifiers:
            – Type: issn-electronic
              Value: 2045-2322
          Numbering:
            – Type: volume
              Value: 11
            – Type: issue
              Value: 1
          Titles:
            – TitleFull: Scientific reports
              Type: main
ResultId 1