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Unlocking capacities of genomics for the COVID-19 response and future pandemics.

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Title: Unlocking capacities of genomics for the COVID-19 response and future pandemics.
Authors: Knyazev S; Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA., Chhugani K; Department of Pharmacology and Pharmaceutical Sciences, School of Pharmacy, University of Southern California, Los Angeles, CA, USA., Sarwal V; Department of Computer Science, University of California Los Angeles, Los Angeles, CA, USA., Ayyala R; Department of Translational Biomedical Informatics, University of Southern California, Los Angeles, CA, USA., Singh H; Department of Electrical Engineering, Indian Institute of Technology, Hauz Khas, New Delhi, India., Karthikeyan S; Department of Pediatrics, University of California, San Diego, La Jolla, CA, USA., Deshpande D; Department of Pharmacology and Pharmaceutical Sciences, School of Pharmacy, University of Southern California, Los Angeles, CA, USA., Baykal PI; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Basel, Switzerland., Comarova Z; Astani Department of Civil and Environmental Engineering, University of Southern California, Los Angeles, CA, USA., Lu A; Department of Pharmacology and Pharmaceutical Sciences, School of Pharmacy, University of Southern California, Los Angeles, CA, USA., Porozov Y; World-Class Research Center 'Digital biodesign and personalized healthcare', I.M. Sechenov First Moscow State Medical University, Moscow, Russia.; Department of Computational Biology, Sirius University of Science and Technology, Sochi, Russia., Vasylyeva TI; Department of Medicine, University of California, San Diego, La Jolla, CA, USA., Wertheim JO; Department of Medicine, University of California, San Diego, La Jolla, CA, USA., Tierney BT; Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA., Chiu CY; Department of Laboratory Medicine, University of California, San Francisco, San Francisco, CA, USA.; Department of Medicine, Division of Infectious Diseases, University of California, San Francisco, San Francisco, CA, USA.; UCSF-Abbott Viral Diagnostics and Discovery Center, University of California, San Francisco, San Francisco, CA, USA., Sun R; Department of Molecular and Medical Pharmacology, University of California, Los Angeles, Los Angeles, CA, USA.; School of Biomedical Sciences, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, P.R. China., Wu A; Institute of Systems Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, China.; Suzhou Institute of Systems Medicine, Suzhou, China., Abedalthagafi MS; Genomics Research Department, Saudi Human Genome Project, King Fahad Medical City and King Abdulaziz City for Science and Technology, Riyadh, Saudi Arabia.; King Salman Center for Disability Research, Riyadh, Saudi Arabia., Pak VM; Emory University, School of Nursing, Atlanta, GA, CA, USA.; Emory University, Rollins School of Public Health, Department of Epidemiology, Atlanta, GA, CA, USA., Nagaraj SH; Centre for Genomics and Personalised Health, Queensland University of Technology, Brisbane, Queensland, Australia.; Translational Research Institute, Brisbane, Queensland, Australia., Smith AL; Astani Department of Civil and Environmental Engineering, University of Southern California, Los Angeles, CA, USA., Skums P; Department of Computer Science, College of Art and Science, Georgia State University, Atlanta, GA, USA., Pasaniuc B; Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA.; Bioinformatics Interdepartmental Program, University of California, Los Angeles, Los Angeles, CA, USA.; Department of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA.; Department of Computational Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA.; Institute of Precision Health, University of California, Los Angeles, Los Angeles, CA, USA., Komissarov A; Smorodintsev Research Institute of Influenza, Saint Petersburg, Russia., Mason CE; Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA.; The HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsaud Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY, USA.; The WorldQuant Initiative for Quantitative Prediction, Weill Cornell Medicine, New York, NY, USA.; The Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY, USA., Bortz E; Department of Biological Sciences, University of Alaska Anchorage, Anchorage, AK, CA, USA., Lemey P; Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven-University of Leuven, Leuven, Belgium., Kondrashov F; Institute of Science and Technology Austria, Klosterneuburg, Austria., Beerenwinkel N; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Basel, Switzerland., Lam TT; State Key Laboratory of Emerging Infectious Diseases, School of Public Health, The University of Hong Kong, Hong Kong SAR, P.R. China.; Laboratory of Data Discovery for Health Limited, Hong Kong SAR, P.R. China.; Centre for Immunology & Infection Limited, Hong Kong SAR, P.R. China., Wu NC; Department of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA.; Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.; Center for Biophysics and Quantitative Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.; Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA., Zelikovsky A; Department of Computer Science, College of Art and Science, Georgia State University, Atlanta, GA, USA., Knight R; Department of Pediatrics, University of California, San Diego, La Jolla, CA, USA.; Department of Bioengineering, University of California, San Diego, La Jolla, CA, USA.; Department of Computer Science & Engineering, University of California, San Diego, La Jolla, CA, USA.; Center for Microbiome Innovation, University of California, San Diego, La Jolla, CA, USA., Crandall KA; Computational Biology Institute and Department of Biostatistics & Bioinformatics, Milken Institute School of Public Health, George Washington University, Washington, DC, USA., Mangul S; Department of Clinical Pharmacy, School of Pharmacy, University of Southern California, Los Angeles, CA, USA. serghei.mangul@gmail.com.
Source: Nature methods [Nat Methods] 2022 Apr; Vol. 19 (4), pp. 374-380.
Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, P.H.S.
Journal Info: Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: MEDLINE
Database: MEDLINE Ultimate
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