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Early detection and surveillance of SARS-CoV-2 genomic variants in wastewater using COJAC.

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Title: Early detection and surveillance of SARS-CoV-2 genomic variants in wastewater using COJAC.
Authors: Jahn K; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland., Dreifuss D; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland., Topolsky I; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland., Kull A; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland., Ganesanandamoorthy P; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland., Fernandez-Cassi X; Laboratory of Environmental Chemistry, School of Architecture, Civil and Environmental Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland., Bänziger C; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland., Devaux AJ; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland., Stachler E; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland., Caduff L; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland., Cariti F; Laboratory of Environmental Chemistry, School of Architecture, Civil and Environmental Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland., Corzón AT; Laboratory of Environmental Chemistry, School of Architecture, Civil and Environmental Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland., Fuhrmann L; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland., Chen C; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland., Jablonski KP; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland., Nadeau S; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland., Feldkamp M; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland., Beisel C; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland., Aquino C; Functional Genomics Center Zurich, ETH Zurich, Zurich, Switzerland., Stadler T; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland., Ort C; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland., Kohn T; Laboratory of Environmental Chemistry, School of Architecture, Civil and Environmental Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland., Julian TR; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland.; Swiss Tropical and Public Health Institute, Basel, Switzerland.; University of Basel, Basel, Switzerland., Beerenwinkel N; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland. niko.beerenwinkel@bsse.ethz.ch.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland. niko.beerenwinkel@bsse.ethz.ch.
Source: Nature microbiology [Nat Microbiol] 2022 Aug; Vol. 7 (8), pp. 1151-1160. Date of Electronic Publication: 2022 Jul 18.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101674869 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2058-5276 (Electronic) Linking ISSN: 20585276 NLM ISO Abbreviation: Nat Microbiol Subsets: MEDLINE
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  Data: Early detection and surveillance of SARS-CoV-2 genomic variants in wastewater using COJAC.
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  Data: <searchLink fieldCode="AU" term="%22Jahn+K%22">Jahn K</searchLink>; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Dreifuss+D%22">Dreifuss D</searchLink>; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Topolsky+I%22">Topolsky I</searchLink>; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Kull+A%22">Kull A</searchLink>; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland.<br /><searchLink fieldCode="AU" term="%22Ganesanandamoorthy+P%22">Ganesanandamoorthy P</searchLink>; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland.<br /><searchLink fieldCode="AU" term="%22Fernandez-Cassi+X%22">Fernandez-Cassi X</searchLink>; Laboratory of Environmental Chemistry, School of Architecture, Civil and Environmental Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Bänziger+C%22">Bänziger C</searchLink>; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland.<br /><searchLink fieldCode="AU" term="%22Devaux+AJ%22">Devaux AJ</searchLink>; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland.<br /><searchLink fieldCode="AU" term="%22Stachler+E%22">Stachler E</searchLink>; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland.<br /><searchLink fieldCode="AU" term="%22Caduff+L%22">Caduff L</searchLink>; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland.<br /><searchLink fieldCode="AU" term="%22Cariti+F%22">Cariti F</searchLink>; Laboratory of Environmental Chemistry, School of Architecture, Civil and Environmental Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Corzón+AT%22">Corzón AT</searchLink>; Laboratory of Environmental Chemistry, School of Architecture, Civil and Environmental Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Fuhrmann+L%22">Fuhrmann L</searchLink>; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Chen+C%22">Chen C</searchLink>; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Jablonski+KP%22">Jablonski KP</searchLink>; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Nadeau+S%22">Nadeau S</searchLink>; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Feldkamp+M%22">Feldkamp M</searchLink>; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Beisel+C%22">Beisel C</searchLink>; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Aquino+C%22">Aquino C</searchLink>; Functional Genomics Center Zurich, ETH Zurich, Zurich, Switzerland.<br /><searchLink fieldCode="AU" term="%22Stadler+T%22">Stadler T</searchLink>; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Ort+C%22">Ort C</searchLink>; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland.<br /><searchLink fieldCode="AU" term="%22Kohn+T%22">Kohn T</searchLink>; Laboratory of Environmental Chemistry, School of Architecture, Civil and Environmental Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Julian+TR%22">Julian TR</searchLink>; Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland.; Swiss Tropical and Public Health Institute, Basel, Switzerland.; University of Basel, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Beerenwinkel+N%22">Beerenwinkel N</searchLink>; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland. niko.beerenwinkel@bsse.ethz.ch.; SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland. niko.beerenwinkel@bsse.ethz.ch.
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  Data: <searchLink fieldCode="JN" term="%22101674869%22">Nature microbiology</searchLink> [Nat Microbiol] 2022 Aug; Vol. 7 (8), pp. 1151-1160. <i>Date of Electronic Publication: </i>2022 Jul 18.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Nature+Publishing+Group%22">Nature Publishing Group </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101674869 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>2058-5276 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2220585276%22">20585276 </searchLink><i>NLM ISO Abbreviation: </i>Nat Microbiol <i>Subsets: </i>MEDLINE
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