AntiSplodge: a neural-network-based RNA-profile deconvolution pipeline designed for spatial transcriptomics.
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| Title: | AntiSplodge: a neural-network-based RNA-profile deconvolution pipeline designed for spatial transcriptomics. |
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| Authors: | Lund JB; Digital Health & Machine Learning Research Group, Hasso Plattner Institut for Digital Engineering, Potsdam, Germany., Lindberg EL; Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany., Maatz H; Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany.; DZHK (German Centre for Cardiovascular Research), Partner Site Berlin, Berlin, Germany., Pottbaecker F; Digital Health & Machine Learning Research Group, Hasso Plattner Institut for Digital Engineering, Potsdam, Germany., Hübner N; Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany.; DZHK (German Centre for Cardiovascular Research), Partner Site Berlin, Berlin, Germany.; Charite, Universitätsmedizin Berlin, Berlin, Germany., Lippert C; Digital Health & Machine Learning Research Group, Hasso Plattner Institut for Digital Engineering, Potsdam, Germany.; Hasso Plattner Institute for Digital Health at Mount Sinai, Icahn School of Medicine at Mount Sinai, New York, NY, USA. |
| Source: | NAR genomics and bioinformatics [NAR Genom Bioinform] 2022 Oct 10; Vol. 4 (4), pp. lqac073. Date of Electronic Publication: 2022 Oct 10 (Print Publication: 2022). |
| Publication Type: | Journal Article |
| Journal Info: | Publisher: Oxford University Press Country of Publication: England NLM ID: 101756213 Publication Model: eCollection Cited Medium: Internet ISSN: 2631-9268 (Electronic) Linking ISSN: 26319268 NLM ISO Abbreviation: NAR Genom Bioinform Subsets: PubMed not MEDLINE |
| Database: | MEDLINE Ultimate |
| FullText | Links: – Type: pdflink Text: Availability: 0 |
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| Header | DbId: mdl DbLabel: MEDLINE Ultimate An: 36225530 AccessLevel: 2 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: AntiSplodge: a neural-network-based RNA-profile deconvolution pipeline designed for spatial transcriptomics. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AU" term="%22Lund+JB%22">Lund JB</searchLink>; Digital Health & Machine Learning Research Group, Hasso Plattner Institut for Digital Engineering, Potsdam, Germany.<br /><searchLink fieldCode="AU" term="%22Lindberg+EL%22">Lindberg EL</searchLink>; Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany.<br /><searchLink fieldCode="AU" term="%22Maatz+H%22">Maatz H</searchLink>; Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany.; DZHK (German Centre for Cardiovascular Research), Partner Site Berlin, Berlin, Germany.<br /><searchLink fieldCode="AU" term="%22Pottbaecker+F%22">Pottbaecker F</searchLink>; Digital Health & Machine Learning Research Group, Hasso Plattner Institut for Digital Engineering, Potsdam, Germany.<br /><searchLink fieldCode="AU" term="%22Hübner+N%22">Hübner N</searchLink>; Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany.; DZHK (German Centre for Cardiovascular Research), Partner Site Berlin, Berlin, Germany.; Charite, Universitätsmedizin Berlin, Berlin, Germany.<br /><searchLink fieldCode="AU" term="%22Lippert+C%22">Lippert C</searchLink>; Digital Health & Machine Learning Research Group, Hasso Plattner Institut for Digital Engineering, Potsdam, Germany.; Hasso Plattner Institute for Digital Health at Mount Sinai, Icahn School of Medicine at Mount Sinai, New York, NY, USA. – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%22101756213%22">NAR genomics and bioinformatics</searchLink> [NAR Genom Bioinform] 2022 Oct 10; Vol. 4 (4), pp. lqac073. <i>Date of Electronic Publication: </i>2022 Oct 10 (<i>Print Publication: </i>2022). – Name: TypePub Label: Publication Type Group: TypPub Data: Journal Article – Name: TitleSource Label: Journal Info Group: Src Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Oxford+University+Press%22">Oxford University Press </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101756213 <i>Publication Model: </i>eCollection <i>Cited Medium: </i>Internet <i>ISSN: </i>2631-9268 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2226319268%22">26319268 </searchLink><i>NLM ISO Abbreviation: </i>NAR Genom Bioinform <i>Subsets: </i>PubMed not MEDLINE |
| PLink | https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=36225530 |
| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1093/nargab/lqac073 Languages: – Code: eng Text: English PhysicalDescription: Pagination: StartPage: lqac073 Titles: – TitleFull: AntiSplodge: a neural-network-based RNA-profile deconvolution pipeline designed for spatial transcriptomics. Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Lund JB – PersonEntity: Name: NameFull: Lindberg EL – PersonEntity: Name: NameFull: Maatz H – PersonEntity: Name: NameFull: Pottbaecker F – PersonEntity: Name: NameFull: Hübner N – PersonEntity: Name: NameFull: Lippert C IsPartOfRelationships: – BibEntity: Dates: – D: 10 M: 10 Text: 2022 Oct 10 Type: published Y: 2022 Identifiers: – Type: issn-electronic Value: 2631-9268 Numbering: – Type: volume Value: 4 – Type: issue Value: 4 Titles: – TitleFull: NAR genomics and bioinformatics Type: main |
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