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Single-cell multi-omics analysis of COVID-19 patients with pre-existing autoimmune diseases shows aberrant immune responses to infection.

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Title: Single-cell multi-omics analysis of COVID-19 patients with pre-existing autoimmune diseases shows aberrant immune responses to infection.
Authors: Barmada A; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.; Department of Medical Genetics, University of Cambridge, Cambridge, United Kingdom., Handfield LF; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom., Godoy-Tena G; Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), Barcelona, Spain., de la Calle-Fabregat C; Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), Barcelona, Spain., Ciudad L; Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), Barcelona, Spain., Arutyunyan A; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom., Andrés-León E; Instituto de Parasitología y Biomedicina López-Neyra, Consejo Superior de Investigaciones Científicas (IPBLN-CSIC), Granada, Spain., Hoo R; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom., Porter T; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom., Oszlanczi A; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom., Richardson L; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom., Calero-Nieto FJ; Department of Haematology and Wellcome & MRC Cambridge Stem Cell Institute, University of Cambridge, Cambridge, United Kingdom., Wilson NK; Department of Haematology and Wellcome & MRC Cambridge Stem Cell Institute, University of Cambridge, Cambridge, United Kingdom., Marchese D; CNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Barcelona, Spain., Sancho-Serra C; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom., Carrillo J; IrsiCaixa AIDS Research Institute, Hospital Germans Trias i Pujol, Badalona, Spain., Presas-Rodríguez S; MS Unit, Department of Neurology, Germans Trias i Pujol University Hospital, Barcelona, Spain., Ramo-Tello C; MS Unit, Department of Neurology, Germans Trias i Pujol University Hospital, Barcelona, Spain., Ruiz-Sanmartin A; Department of Intensive Care, Hospital Universitari Vall d'Hebron, Shock, Organ Dysfunction and Resuscitation Research Group, Vall d'Hebron Research Institute (VHIR), Barcelona, Spain., Ferrer R; Department of Intensive Care, Hospital Universitari Vall d'Hebron, Shock, Organ Dysfunction and Resuscitation Research Group, Vall d'Hebron Research Institute (VHIR), Barcelona, Spain., Ruiz-Rodriguez JC; Department of Intensive Care, Hospital Universitari Vall d'Hebron, Shock, Organ Dysfunction and Resuscitation Research Group, Vall d'Hebron Research Institute (VHIR), Barcelona, Spain., Martínez-Gallo M; Division of Immunology, Hospital Universitari Vall d'Hebron (HUVH), Vall d'Hebron Research Institute (VHIR), Barcelona, Spain., Munera-Campos M; Dermatology Service, Germans Trias i Pujol University Hospital, LCMN, Germans Trias i Pujol Research Institute (IGTP), Barcelona, Spain., Carrascosa JM; Dermatology Service, Germans Trias i Pujol University Hospital, LCMN, Germans Trias i Pujol Research Institute (IGTP), Barcelona, Spain., Göttgens B; Department of Haematology and Wellcome & MRC Cambridge Stem Cell Institute, University of Cambridge, Cambridge, United Kingdom., Heyn H; CNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.; Universitat Pompeu Fabra (UPF), Barcelona, Spain., Prigmore E; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom., Casafont-Solé I; Department of Rheumatology, Germans Trias i Pujol University Hospital, LCMN, Germans Trias i Pujol Research Institute (IGTP), Barcelona, Spain.; Department of Infectious Diseases, Germans Trias i Pujol University Hospital, Barcelona, Spain., Solanich X; Department of Internal Medicine, Hospital Universitari de Bellvitge, Bellvitge Biomedical Research Institute (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain., Sánchez-Cerrillo I; Department of Immunology, Hospital Universitario La Princesa, IIS-IP, Madrid, Spain., González-Álvaro I; Rheumatology Service, Hospital Universitario La Princesa, IIS-IP, Madrid, Spain., Raimondo MG; Department of Internal Medicine 3, Friedrich-Alexander-University Erlangen-Nürnberg (FAU) and Universitätsklinikum Erlangen, Erlangen, Germany.; Deutsches Zentrum Immuntherapie (DZI), Friedrich-Alexander-University Erlangen-Nürnberg and Universitätsklinikum Erlangen, Erlangen, Germany., Ramming A; Department of Internal Medicine 3, Friedrich-Alexander-University Erlangen-Nürnberg (FAU) and Universitätsklinikum Erlangen, Erlangen, Germany.; Deutsches Zentrum Immuntherapie (DZI), Friedrich-Alexander-University Erlangen-Nürnberg and Universitätsklinikum Erlangen, Erlangen, Germany., Martin J; Instituto de Parasitología y Biomedicina López-Neyra, Consejo Superior de Investigaciones Científicas (IPBLN-CSIC), Granada, Spain., Martínez-Cáceres E; Division of Immunology, Germans Trias i Pujol University Hospital, LCMN, Germans Trias i Pujol Research Institute (IGTP), Barcelona, Spain.; Department of Cell Biology, Physiology, and Immunology, Universitat Autònoma, Barcelona, Spain., Ballestar E; Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), Barcelona, Spain., Vento-Tormo R; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom., Rodríguez-Ubreva J; Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), Barcelona, Spain.
Source: European journal of immunology [Eur J Immunol] 2024 Jan; Vol. 54 (1), pp. e2350633. Date of Electronic Publication: 2023 Oct 20.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Wiley-VCH Country of Publication: Germany NLM ID: 1273201 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1521-4141 (Electronic) Linking ISSN: 00142980 NLM ISO Abbreviation: Eur J Immunol Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Single-cell multi-omics analysis of COVID-19 patients with pre-existing autoimmune diseases shows aberrant immune responses to infection.
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  Data: <searchLink fieldCode="AU" term="%22Barmada+A%22">Barmada A</searchLink>; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.; Department of Medical Genetics, University of Cambridge, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Handfield+LF%22">Handfield LF</searchLink>; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Godoy-Tena+G%22">Godoy-Tena G</searchLink>; Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22de+la+Calle-Fabregat+C%22">de la Calle-Fabregat C</searchLink>; Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Ciudad+L%22">Ciudad L</searchLink>; Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Arutyunyan+A%22">Arutyunyan A</searchLink>; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Andrés-León+E%22">Andrés-León E</searchLink>; Instituto de Parasitología y Biomedicina López-Neyra, Consejo Superior de Investigaciones Científicas (IPBLN-CSIC), Granada, Spain.<br /><searchLink fieldCode="AU" term="%22Hoo+R%22">Hoo R</searchLink>; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Porter+T%22">Porter T</searchLink>; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Oszlanczi+A%22">Oszlanczi A</searchLink>; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Richardson+L%22">Richardson L</searchLink>; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Calero-Nieto+FJ%22">Calero-Nieto FJ</searchLink>; Department of Haematology and Wellcome & MRC Cambridge Stem Cell Institute, University of Cambridge, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Wilson+NK%22">Wilson NK</searchLink>; Department of Haematology and Wellcome & MRC Cambridge Stem Cell Institute, University of Cambridge, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Marchese+D%22">Marchese D</searchLink>; CNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Sancho-Serra+C%22">Sancho-Serra C</searchLink>; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Carrillo+J%22">Carrillo J</searchLink>; IrsiCaixa AIDS Research Institute, Hospital Germans Trias i Pujol, Badalona, Spain.<br /><searchLink fieldCode="AU" term="%22Presas-Rodríguez+S%22">Presas-Rodríguez S</searchLink>; MS Unit, Department of Neurology, Germans Trias i Pujol University Hospital, Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Ramo-Tello+C%22">Ramo-Tello C</searchLink>; MS Unit, Department of Neurology, Germans Trias i Pujol University Hospital, Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Ruiz-Sanmartin+A%22">Ruiz-Sanmartin A</searchLink>; Department of Intensive Care, Hospital Universitari Vall d'Hebron, Shock, Organ Dysfunction and Resuscitation Research Group, Vall d'Hebron Research Institute (VHIR), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Ferrer+R%22">Ferrer R</searchLink>; Department of Intensive Care, Hospital Universitari Vall d'Hebron, Shock, Organ Dysfunction and Resuscitation Research Group, Vall d'Hebron Research Institute (VHIR), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Ruiz-Rodriguez+JC%22">Ruiz-Rodriguez JC</searchLink>; Department of Intensive Care, Hospital Universitari Vall d'Hebron, Shock, Organ Dysfunction and Resuscitation Research Group, Vall d'Hebron Research Institute (VHIR), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Martínez-Gallo+M%22">Martínez-Gallo M</searchLink>; Division of Immunology, Hospital Universitari Vall d'Hebron (HUVH), Vall d'Hebron Research Institute (VHIR), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Munera-Campos+M%22">Munera-Campos M</searchLink>; Dermatology Service, Germans Trias i Pujol University Hospital, LCMN, Germans Trias i Pujol Research Institute (IGTP), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Carrascosa+JM%22">Carrascosa JM</searchLink>; Dermatology Service, Germans Trias i Pujol University Hospital, LCMN, Germans Trias i Pujol Research Institute (IGTP), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Göttgens+B%22">Göttgens B</searchLink>; Department of Haematology and Wellcome & MRC Cambridge Stem Cell Institute, University of Cambridge, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Heyn+H%22">Heyn H</searchLink>; CNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.; Universitat Pompeu Fabra (UPF), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Prigmore+E%22">Prigmore E</searchLink>; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Casafont-Solé+I%22">Casafont-Solé I</searchLink>; Department of Rheumatology, Germans Trias i Pujol University Hospital, LCMN, Germans Trias i Pujol Research Institute (IGTP), Barcelona, Spain.; Department of Infectious Diseases, Germans Trias i Pujol University Hospital, Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Solanich+X%22">Solanich X</searchLink>; Department of Internal Medicine, Hospital Universitari de Bellvitge, Bellvitge Biomedical Research Institute (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Sánchez-Cerrillo+I%22">Sánchez-Cerrillo I</searchLink>; Department of Immunology, Hospital Universitario La Princesa, IIS-IP, Madrid, Spain.<br /><searchLink fieldCode="AU" term="%22González-Álvaro+I%22">González-Álvaro I</searchLink>; Rheumatology Service, Hospital Universitario La Princesa, IIS-IP, Madrid, Spain.<br /><searchLink fieldCode="AU" term="%22Raimondo+MG%22">Raimondo MG</searchLink>; Department of Internal Medicine 3, Friedrich-Alexander-University Erlangen-Nürnberg (FAU) and Universitätsklinikum Erlangen, Erlangen, Germany.; Deutsches Zentrum Immuntherapie (DZI), Friedrich-Alexander-University Erlangen-Nürnberg and Universitätsklinikum Erlangen, Erlangen, Germany.<br /><searchLink fieldCode="AU" term="%22Ramming+A%22">Ramming A</searchLink>; Department of Internal Medicine 3, Friedrich-Alexander-University Erlangen-Nürnberg (FAU) and Universitätsklinikum Erlangen, Erlangen, Germany.; Deutsches Zentrum Immuntherapie (DZI), Friedrich-Alexander-University Erlangen-Nürnberg and Universitätsklinikum Erlangen, Erlangen, Germany.<br /><searchLink fieldCode="AU" term="%22Martin+J%22">Martin J</searchLink>; Instituto de Parasitología y Biomedicina López-Neyra, Consejo Superior de Investigaciones Científicas (IPBLN-CSIC), Granada, Spain.<br /><searchLink fieldCode="AU" term="%22Martínez-Cáceres+E%22">Martínez-Cáceres E</searchLink>; Division of Immunology, Germans Trias i Pujol University Hospital, LCMN, Germans Trias i Pujol Research Institute (IGTP), Barcelona, Spain.; Department of Cell Biology, Physiology, and Immunology, Universitat Autònoma, Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Ballestar+E%22">Ballestar E</searchLink>; Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Vento-Tormo+R%22">Vento-Tormo R</searchLink>; Wellcome Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Rodríguez-Ubreva+J%22">Rodríguez-Ubreva J</searchLink>; Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), Barcelona, Spain.
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