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Predicting Antigen-Specificities of Orphan T Cell Receptors from Cancer Patients with TCRpcDist.

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Title: Predicting Antigen-Specificities of Orphan T Cell Receptors from Cancer Patients with TCRpcDist.
Authors: Perez MAS; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Molecular Modeling Group, SIB Swiss Institute of Bioinformatics, University of Lausanne, Quartier UNIL-Sorge, Bâtiment Amphipole, Lausanne, CH-1015, Switzerland., Chiffelle J; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland., Bobisse S; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland., Mayol-Rullan F; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Molecular Modeling Group, SIB Swiss Institute of Bioinformatics, University of Lausanne, Quartier UNIL-Sorge, Bâtiment Amphipole, Lausanne, CH-1015, Switzerland., Bugnon M; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Molecular Modeling Group, SIB Swiss Institute of Bioinformatics, University of Lausanne, Quartier UNIL-Sorge, Bâtiment Amphipole, Lausanne, CH-1015, Switzerland., Bragina ME; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Molecular Modeling Group, SIB Swiss Institute of Bioinformatics, University of Lausanne, Quartier UNIL-Sorge, Bâtiment Amphipole, Lausanne, CH-1015, Switzerland., Arnaud M; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland., Sauvage C; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland., Barras D; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland., Laniti DD; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland., Huber F; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland., Bassani-Sternberg M; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland., Coukos G; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland.; Department of Oncology, Immuno-Oncology Service, Lausanne University Hospital, Lausanne, CH-1011, Switzerland., Harari A; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland., Zoete V; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Molecular Modeling Group, SIB Swiss Institute of Bioinformatics, University of Lausanne, Quartier UNIL-Sorge, Bâtiment Amphipole, Lausanne, CH-1015, Switzerland.
Source: Advanced science (Weinheim, Baden-Wurttemberg, Germany) [Adv Sci (Weinh)] 2024 Oct; Vol. 11 (40), pp. e2405949. Date of Electronic Publication: 2024 Aug 19.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: WILEY-VCH Country of Publication: Germany NLM ID: 101664569 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2198-3844 (Electronic) Linking ISSN: 21983844 NLM ISO Abbreviation: Adv Sci (Weinh) Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Predicting Antigen-Specificities of Orphan T Cell Receptors from Cancer Patients with TCRpcDist.
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  Data: <searchLink fieldCode="AU" term="%22Perez+MAS%22">Perez MAS</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Molecular Modeling Group, SIB Swiss Institute of Bioinformatics, University of Lausanne, Quartier UNIL-Sorge, Bâtiment Amphipole, Lausanne, CH-1015, Switzerland.<br /><searchLink fieldCode="AU" term="%22Chiffelle+J%22">Chiffelle J</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland.<br /><searchLink fieldCode="AU" term="%22Bobisse+S%22">Bobisse S</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland.<br /><searchLink fieldCode="AU" term="%22Mayol-Rullan+F%22">Mayol-Rullan F</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Molecular Modeling Group, SIB Swiss Institute of Bioinformatics, University of Lausanne, Quartier UNIL-Sorge, Bâtiment Amphipole, Lausanne, CH-1015, Switzerland.<br /><searchLink fieldCode="AU" term="%22Bugnon+M%22">Bugnon M</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Molecular Modeling Group, SIB Swiss Institute of Bioinformatics, University of Lausanne, Quartier UNIL-Sorge, Bâtiment Amphipole, Lausanne, CH-1015, Switzerland.<br /><searchLink fieldCode="AU" term="%22Bragina+ME%22">Bragina ME</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Molecular Modeling Group, SIB Swiss Institute of Bioinformatics, University of Lausanne, Quartier UNIL-Sorge, Bâtiment Amphipole, Lausanne, CH-1015, Switzerland.<br /><searchLink fieldCode="AU" term="%22Arnaud+M%22">Arnaud M</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland.<br /><searchLink fieldCode="AU" term="%22Sauvage+C%22">Sauvage C</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland.<br /><searchLink fieldCode="AU" term="%22Barras+D%22">Barras D</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland.<br /><searchLink fieldCode="AU" term="%22Laniti+DD%22">Laniti DD</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland.<br /><searchLink fieldCode="AU" term="%22Huber+F%22">Huber F</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland.<br /><searchLink fieldCode="AU" term="%22Bassani-Sternberg+M%22">Bassani-Sternberg M</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland.<br /><searchLink fieldCode="AU" term="%22Coukos+G%22">Coukos G</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland.; Department of Oncology, Immuno-Oncology Service, Lausanne University Hospital, Lausanne, CH-1011, Switzerland.<br /><searchLink fieldCode="AU" term="%22Harari+A%22">Harari A</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Center for Cell Therapy, CHUV-Ludwig Institute, Lausanne, CH-1011, Switzerland.<br /><searchLink fieldCode="AU" term="%22Zoete+V%22">Zoete V</searchLink>; Department of Oncology, Ludwig Institute for Cancer Research, Lausanne Branch, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Agora Cancer Research Center, Lausanne, CH-1005, Switzerland.; Molecular Modeling Group, SIB Swiss Institute of Bioinformatics, University of Lausanne, Quartier UNIL-Sorge, Bâtiment Amphipole, Lausanne, CH-1015, Switzerland.
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