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A Case Demonstration of the Open Health Natural Language Processing Toolkit From the National COVID-19 Cohort Collaborative and the Researching COVID to Enhance Recovery Programs for a Natural Language Processing System for COVID-19 or Postacute Sequelae of SARS CoV-2 Infection: Algorithm Development and Validation.

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Title: A Case Demonstration of the Open Health Natural Language Processing Toolkit From the National COVID-19 Cohort Collaborative and the Researching COVID to Enhance Recovery Programs for a Natural Language Processing System for COVID-19 or Postacute Sequelae of SARS CoV-2 Infection: Algorithm Development and Validation.
Authors: Wen A; Department of Artificial Intelligence and Informatics, Mayo Clinic, Rochester, MN, United States.; McWilliams School of Biomedical Informatics, University of Texas Health Sciences Center at Houston, Houston, TX, United States., Wang L; Department of Artificial Intelligence and Informatics, Mayo Clinic, Rochester, MN, United States.; McWilliams School of Biomedical Informatics, University of Texas Health Sciences Center at Houston, Houston, TX, United States., He H; Department of Artificial Intelligence and Informatics, Mayo Clinic, Rochester, MN, United States., Fu S; Department of Artificial Intelligence and Informatics, Mayo Clinic, Rochester, MN, United States.; McWilliams School of Biomedical Informatics, University of Texas Health Sciences Center at Houston, Houston, TX, United States., Liu S; Department of Artificial Intelligence and Informatics, Mayo Clinic, Rochester, MN, United States., Hanauer DA; Department of Learning Health Sciences, University of Michigan Medical School, Ann Arbor, MI, United States., Harris DR; Institute for Pharmaceutical Outcomes and Policy, College of Pharmacy, University of Kentucky, Lexington, KY, United States., Kavuluru R; Division of Biomedical Informatics, Department of Internal Medicine, University of Kentucky, Lexington, KY, United States., Zhang R; Division of Health Data Science, University of Minnesota Medical School, Minneapolis, MN, United States., Natarajan K; Department of Biomedical Informatics, Columbia University Irving Medical Center, New York, NY, United States., Pavinkurve NP; Department of Biomedical Informatics, Columbia University Irving Medical Center, New York, NY, United States., Hajagos J; Department of Biomedical Informatics, Stony Brook Medicine, Stony Brook, NY, United States., Rajupet S; Department of Biomedical Informatics, Stony Brook Medicine, Stony Brook, NY, United States., Lingam V; Department of Biomedical Informatics, Stony Brook Medicine, Stony Brook, NY, United States., Saltz M; Department of Biomedical Informatics, Stony Brook Medicine, Stony Brook, NY, United States., Elowsky C; Department of Biomedical Informatics, Stony Brook Medicine, Stony Brook, NY, United States., Moffitt RA; Department of Biomedical Informatics, Stony Brook Medicine, Stony Brook, NY, United States., Koraishy FM; Division of Nephrology, Stony Brook Medicine, Stony Brook, NY, United States., Palchuk MB; TriNetX LLC, Cambridge, MA, United States., Donovan J; TriNetX LLC, Cambridge, MA, United States., Lingrey L; TriNetX LLC, Cambridge, MA, United States., Stone-DerHagopian G; TriNetX LLC, Cambridge, MA, United States., Miller RT; Clinical and Translational Science Institute, Tufts Medical Center, Boston, MA, United States., Williams AE; Clinical and Translational Science Institute, Tufts Medical Center, Boston, MA, United States.; Institute for Clinical Research and Health Policy Studies, Tufts Medical Center, Boston, MA, United States., Leese PJ; North Carolina Translational and Clinical Sciences Institute, University of North Carolina School of Medicine, Chapel Hill, NC, United States., Kovach PI; North Carolina Translational and Clinical Sciences Institute, University of North Carolina School of Medicine, Chapel Hill, NC, United States., Pfaff ER; North Carolina Translational and Clinical Sciences Institute, University of North Carolina School of Medicine, Chapel Hill, NC, United States., Zemmel M; University of Virginia, Charlottesville, VA, United States., Pates RD; University of Virginia, Charlottesville, VA, United States., Guthe N; Department of Population Health, New York University Grossman School of Medicine, New York, NY, United States., Haendel MA; University of Colorado Anschutz Medical Campus, Denver, CO, United States., Chute CG; Schools of Medicine, Public Health, and Nursing, Johns Hopkins University, Baltimore, MD, United States., Liu H; Department of Artificial Intelligence and Informatics, Mayo Clinic, Rochester, MN, United States.; McWilliams School of Biomedical Informatics, University of Texas Health Sciences Center at Houston, Houston, TX, United States.
Corporate Authors: National COVID Cohort Collaborative; see Acknowledgments, ., RECOVER Initiative; see Acknowledgments, .
Source: JMIR medical informatics [JMIR Med Inform] 2024 Sep 09; Vol. 12, pp. e49997. Date of Electronic Publication: 2024 Sep 09.
Publication Type: Journal Article
Journal Info: Publisher: JMIR Publications Country of Publication: Canada NLM ID: 101645109 Publication Model: Electronic Cited Medium: Print ISSN: 2291-9694 (Print) Linking ISSN: 22919694 NLM ISO Abbreviation: JMIR Med Inform Subsets: PubMed not MEDLINE
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  Data: A Case Demonstration of the Open Health Natural Language Processing Toolkit From the National COVID-19 Cohort Collaborative and the Researching COVID to Enhance Recovery Programs for a Natural Language Processing System for COVID-19 or Postacute Sequelae of SARS CoV-2 Infection: Algorithm Development and Validation.
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Department of Artificial Intelligence and Informatics, Mayo Clinic, Rochester, MN, United States.<br /><searchLink fieldCode="AU" term="%22Hanauer+DA%22">Hanauer DA</searchLink>; Department of Learning Health Sciences, University of Michigan Medical School, Ann Arbor, MI, United States.<br /><searchLink fieldCode="AU" term="%22Harris+DR%22">Harris DR</searchLink>; Institute for Pharmaceutical Outcomes and Policy, College of Pharmacy, University of Kentucky, Lexington, KY, United States.<br /><searchLink fieldCode="AU" term="%22Kavuluru+R%22">Kavuluru R</searchLink>; Division of Biomedical Informatics, Department of Internal Medicine, University of Kentucky, Lexington, KY, United States.<br /><searchLink fieldCode="AU" term="%22Zhang+R%22">Zhang R</searchLink>; Division of Health Data Science, University of Minnesota Medical School, Minneapolis, MN, United States.<br /><searchLink fieldCode="AU" term="%22Natarajan+K%22">Natarajan K</searchLink>; Department of Biomedical Informatics, Columbia University Irving Medical Center, New York, NY, United States.<br /><searchLink fieldCode="AU" term="%22Pavinkurve+NP%22">Pavinkurve NP</searchLink>; 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Department of Biomedical Informatics, Stony Brook Medicine, Stony Brook, NY, United States.<br /><searchLink fieldCode="AU" term="%22Koraishy+FM%22">Koraishy FM</searchLink>; Division of Nephrology, Stony Brook Medicine, Stony Brook, NY, United States.<br /><searchLink fieldCode="AU" term="%22Palchuk+MB%22">Palchuk MB</searchLink>; TriNetX LLC, Cambridge, MA, United States.<br /><searchLink fieldCode="AU" term="%22Donovan+J%22">Donovan J</searchLink>; TriNetX LLC, Cambridge, MA, United States.<br /><searchLink fieldCode="AU" term="%22Lingrey+L%22">Lingrey L</searchLink>; TriNetX LLC, Cambridge, MA, United States.<br /><searchLink fieldCode="AU" term="%22Stone-DerHagopian+G%22">Stone-DerHagopian G</searchLink>; TriNetX LLC, Cambridge, MA, United States.<br /><searchLink fieldCode="AU" term="%22Miller+RT%22">Miller RT</searchLink>; Clinical and Translational Science Institute, Tufts Medical Center, Boston, MA, United States.<br /><searchLink fieldCode="AU" term="%22Williams+AE%22">Williams AE</searchLink>; 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University of Virginia, Charlottesville, VA, United States.<br /><searchLink fieldCode="AU" term="%22Guthe+N%22">Guthe N</searchLink>; Department of Population Health, New York University Grossman School of Medicine, New York, NY, United States.<br /><searchLink fieldCode="AU" term="%22Haendel+MA%22">Haendel MA</searchLink>; University of Colorado Anschutz Medical Campus, Denver, CO, United States.<br /><searchLink fieldCode="AU" term="%22Chute+CG%22">Chute CG</searchLink>; Schools of Medicine, Public Health, and Nursing, Johns Hopkins University, Baltimore, MD, United States.<br /><searchLink fieldCode="AU" term="%22Liu+H%22">Liu H</searchLink>; Department of Artificial Intelligence and Informatics, Mayo Clinic, Rochester, MN, United States.; McWilliams School of Biomedical Informatics, University of Texas Health Sciences Center at Houston, Houston, TX, United States.
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  Data: <searchLink fieldCode="CA" term="%22National+COVID+Cohort+Collaborative%22">National COVID Cohort Collaborative</searchLink>; see Acknowledgments, .<br /><searchLink fieldCode="CA" term="%22RECOVER+Initiative%22">RECOVER Initiative</searchLink>; see Acknowledgments, .
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