Reproducible image-based profiling with Pycytominer.
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| Title: | Reproducible image-based profiling with Pycytominer. |
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| Authors: | Serrano E; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, USA., Chandrasekaran SN; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Bunten D; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, USA., Brewer KI; Independent Researcher, San Francisco, CA, USA., Tomkinson J; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, USA., Kern R; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, USA.; Case Western Reserve University, Cleveland, OH, USA., Bornholdt M; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Fleming SJ; Data Sciences Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Pei R; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Arevalo J; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Tsang H; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Rubinetti V; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, USA., Tromans-Coia C; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Becker T; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Weisbart E; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Bunne C; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Kalinin AA; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Senft R; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Taylor SJ; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, USA., Jamali N; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Adeboye A; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Abbasi HS; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Goodman A; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Genentech gRED, South San Francisco, CA, USA., Caicedo JC; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Morgridge Institute for Research, University of Wisconsin-Madison, Madison, WI, USA., Carpenter AE; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Cimini BA; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Singh S; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA, USA. shantanu@broadinstitute.org., Way GP; Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, USA. gregory.way@cuanschutz.edu. |
| Source: | Nature methods [Nat Methods] 2025 Apr; Vol. 22 (4), pp. 677-680. Date of Electronic Publication: 2025 Mar 03. |
| Publication Type: | Journal Article |
| Journal Info: | Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
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