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Inhibition of human-HPV hybrid ecDNA enhancers reduces oncogene expression and tumor growth in oropharyngeal cancer.

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Title: Inhibition of human-HPV hybrid ecDNA enhancers reduces oncogene expression and tumor growth in oropharyngeal cancer.
Authors: Nakagawa T; Moores Cancer Center, University of California, San Diego, La Jolla, CA, USA. tanakagawa@health.ucsd.edu.; Department of Otorhinolaryngology, Head and Neck Surgery, Chiba University, Graduate School of Medicine, Chiba, Japan. tanakagawa@health.ucsd.edu.; Health and Disease Omics Center, Chiba University, Chiba, Japan. tanakagawa@health.ucsd.edu., Luebeck J; Department of Computer Science and Engineering, UC San Diego, La Jolla, CA, USA., Zhu K; Department of Computer Science and Engineering, UC San Diego, La Jolla, CA, USA., Lange JT; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA., Sasik R; Center for Computational Biology and Bioinformatics, University of California, San Diego, La Jolla, CA, USA., Phillips C; Moores Cancer Center, University of California, San Diego, La Jolla, CA, USA., Sadat S; Moores Cancer Center, University of California, San Diego, La Jolla, CA, USA., Javadzadeh S; Department of Computer Science and Engineering, UC San Diego, La Jolla, CA, USA., Yang Q; Department of Cellular and Molecular Medicine, Center for Epigenomics, University of California, San Diego, La Jolla, CA, USA., Monther A; Moores Cancer Center, University of California, San Diego, La Jolla, CA, USA., Fassardi S; Moores Cancer Center, University of California, San Diego, La Jolla, CA, USA., Wang A; Department of Cellular and Molecular Medicine, Center for Epigenomics, University of California, San Diego, La Jolla, CA, USA., Pestonjamasp K; Cancer Center Microscopy Core, University of California, San Diego, La Jolla, CA, USA., Rosenthal B; Center for Computational Biology and Bioinformatics, University of California, San Diego, La Jolla, CA, USA., Fisch KM; Center for Computational Biology and Bioinformatics, University of California, San Diego, La Jolla, CA, USA., Mischel P; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA., Bafna V; Department of Computer Science and Engineering, UC San Diego, La Jolla, CA, USA., Califano JA; Moores Cancer Center, University of California, San Diego, La Jolla, CA, USA. jcalifano@health.ucsd.edu.; Department of Otolaryngology-Head and Neck Surgery and Gleiberman Head and Neck Cancer Center, University of California, San Diego, La Jolla, CA, USA. jcalifano@health.ucsd.edu.
Source: Nature communications [Nat Commun] 2025 Mar 26; Vol. 16 (1), pp. 2964. Date of Electronic Publication: 2025 Mar 26.
Publication Type: Journal Article
Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Inhibition of human-HPV hybrid ecDNA enhancers reduces oncogene expression and tumor growth in oropharyngeal cancer.
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  Data: <searchLink fieldCode="AU" term="%22Nakagawa+T%22">Nakagawa T</searchLink>; Moores Cancer Center, University of California, San Diego, La Jolla, CA, USA. tanakagawa@health.ucsd.edu.; Department of Otorhinolaryngology, Head and Neck Surgery, Chiba University, Graduate School of Medicine, Chiba, Japan. tanakagawa@health.ucsd.edu.; Health and Disease Omics Center, Chiba University, Chiba, Japan. tanakagawa@health.ucsd.edu.<br /><searchLink fieldCode="AU" term="%22Luebeck+J%22">Luebeck J</searchLink>; Department of Computer Science and Engineering, UC San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Zhu+K%22">Zhu K</searchLink>; Department of Computer Science and Engineering, UC San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Lange+JT%22">Lange JT</searchLink>; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA.<br /><searchLink fieldCode="AU" term="%22Sasik+R%22">Sasik R</searchLink>; Center for Computational Biology and Bioinformatics, University of California, San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Phillips+C%22">Phillips C</searchLink>; Moores Cancer Center, University of California, San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Sadat+S%22">Sadat S</searchLink>; Moores Cancer Center, University of California, San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Javadzadeh+S%22">Javadzadeh S</searchLink>; Department of Computer Science and Engineering, UC San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Yang+Q%22">Yang Q</searchLink>; Department of Cellular and Molecular Medicine, Center for Epigenomics, University of California, San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Monther+A%22">Monther A</searchLink>; Moores Cancer Center, University of California, San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Fassardi+S%22">Fassardi S</searchLink>; Moores Cancer Center, University of California, San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Wang+A%22">Wang A</searchLink>; Department of Cellular and Molecular Medicine, Center for Epigenomics, University of California, San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Pestonjamasp+K%22">Pestonjamasp K</searchLink>; Cancer Center Microscopy Core, University of California, San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Rosenthal+B%22">Rosenthal B</searchLink>; Center for Computational Biology and Bioinformatics, University of California, San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Fisch+KM%22">Fisch KM</searchLink>; Center for Computational Biology and Bioinformatics, University of California, San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Mischel+P%22">Mischel P</searchLink>; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA.<br /><searchLink fieldCode="AU" term="%22Bafna+V%22">Bafna V</searchLink>; Department of Computer Science and Engineering, UC San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Califano+JA%22">Califano JA</searchLink>; Moores Cancer Center, University of California, San Diego, La Jolla, CA, USA. jcalifano@health.ucsd.edu.; Department of Otolaryngology-Head and Neck Surgery and Gleiberman Head and Neck Cancer Center, University of California, San Diego, La Jolla, CA, USA. jcalifano@health.ucsd.edu.
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