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VarMeter2: An enhanced structure-based method for predicting pathogenic missense variants through Mahalanobis distance.

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Title: VarMeter2: An enhanced structure-based method for predicting pathogenic missense variants through Mahalanobis distance.
Authors: Ohno S; Division of Structural Glycobiology, Institute of Molecular Biomembrane and Glycobiology, Tohoku Medical and Pharmaceutical University, Sendai, Miyagi 981-8558, Japan., Ogura C; Department of Science and Engineering for Sustainable Innovation, Faculty of Science and Engineering, Soka University, Japan., Yabuki A; Department of Biosciences, Graduate School of Science and Engineering, Soka University, Japan., Itoh K; Glycan and Life Systems Integration Center (GaLSIC), Soka University, Hachioji 192-8577, Japan., Manabe N; Division of Structural Glycobiology, Institute of Molecular Biomembrane and Glycobiology, Tohoku Medical and Pharmaceutical University, Sendai, Miyagi 981-8558, Japan., Angata K; Glycan and Life Systems Integration Center (GaLSIC), Soka University, Hachioji 192-8577, Japan., Togayachi A; Glycan and Life Systems Integration Center (GaLSIC), Soka University, Hachioji 192-8577, Japan., Aoki-Kinoshita K; Department of Biosciences, Graduate School of Science and Engineering, Soka University, Japan.; Glycan and Life Systems Integration Center (GaLSIC), Soka University, Hachioji 192-8577, Japan.; Institute for Glyco-Core Research (iGCORE), Nagoya University, Nagoya 466-8601, Japan., Furukawa JI; Institute for Glyco-Core Research (iGCORE), Nagoya University, Nagoya 466-8601, Japan., Inamori KI; Division of Glycopathology, Institute of Molecular Biomembrane and Glycobiology, Tohoku Medical and Pharmaceutical University, Sendai, Miyagi 981-8558, Japan., Inokuchi JI; Forefront Research Center, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan., Kaname T; Department of Genome Medicine, National Center for Child Health and Development, Tokyo 157-0074, Japan., Nishihara S; Department of Biosciences, Graduate School of Science and Engineering, Soka University, Japan.; Glycan and Life Systems Integration Center (GaLSIC), Soka University, Hachioji 192-8577, Japan., Yamaguchi Y; Division of Structural Glycobiology, Institute of Molecular Biomembrane and Glycobiology, Tohoku Medical and Pharmaceutical University, Sendai, Miyagi 981-8558, Japan.
Source: Computational and structural biotechnology journal [Comput Struct Biotechnol J] 2025 Mar 01; Vol. 27, pp. 1034-1047. Date of Electronic Publication: 2025 Mar 01 (Print Publication: 2025).
Publication Type: Journal Article
Journal Info: Publisher: Elsevier B.V. on behalf of Research Network of Computational and Structural Biotechnology Country of Publication: Netherlands NLM ID: 101585369 Publication Model: eCollection Cited Medium: Print ISSN: 2001-0370 (Print) Linking ISSN: 20010370 NLM ISO Abbreviation: Comput Struct Biotechnol J Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
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  Data: VarMeter2: An enhanced structure-based method for predicting pathogenic missense variants through Mahalanobis distance.
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  Data: <searchLink fieldCode="AU" term="%22Ohno+S%22">Ohno S</searchLink>; Division of Structural Glycobiology, Institute of Molecular Biomembrane and Glycobiology, Tohoku Medical and Pharmaceutical University, Sendai, Miyagi 981-8558, Japan.<br /><searchLink fieldCode="AU" term="%22Ogura+C%22">Ogura C</searchLink>; Department of Science and Engineering for Sustainable Innovation, Faculty of Science and Engineering, Soka University, Japan.<br /><searchLink fieldCode="AU" term="%22Yabuki+A%22">Yabuki A</searchLink>; Department of Biosciences, Graduate School of Science and Engineering, Soka University, Japan.<br /><searchLink fieldCode="AU" term="%22Itoh+K%22">Itoh K</searchLink>; Glycan and Life Systems Integration Center (GaLSIC), Soka University, Hachioji 192-8577, Japan.<br /><searchLink fieldCode="AU" term="%22Manabe+N%22">Manabe N</searchLink>; Division of Structural Glycobiology, Institute of Molecular Biomembrane and Glycobiology, Tohoku Medical and Pharmaceutical University, Sendai, Miyagi 981-8558, Japan.<br /><searchLink fieldCode="AU" term="%22Angata+K%22">Angata K</searchLink>; Glycan and Life Systems Integration Center (GaLSIC), Soka University, Hachioji 192-8577, Japan.<br /><searchLink fieldCode="AU" term="%22Togayachi+A%22">Togayachi A</searchLink>; Glycan and Life Systems Integration Center (GaLSIC), Soka University, Hachioji 192-8577, Japan.<br /><searchLink fieldCode="AU" term="%22Aoki-Kinoshita+K%22">Aoki-Kinoshita K</searchLink>; Department of Biosciences, Graduate School of Science and Engineering, Soka University, Japan.; Glycan and Life Systems Integration Center (GaLSIC), Soka University, Hachioji 192-8577, Japan.; Institute for Glyco-Core Research (iGCORE), Nagoya University, Nagoya 466-8601, Japan.<br /><searchLink fieldCode="AU" term="%22Furukawa+JI%22">Furukawa JI</searchLink>; Institute for Glyco-Core Research (iGCORE), Nagoya University, Nagoya 466-8601, Japan.<br /><searchLink fieldCode="AU" term="%22Inamori+KI%22">Inamori KI</searchLink>; Division of Glycopathology, Institute of Molecular Biomembrane and Glycobiology, Tohoku Medical and Pharmaceutical University, Sendai, Miyagi 981-8558, Japan.<br /><searchLink fieldCode="AU" term="%22Inokuchi+JI%22">Inokuchi JI</searchLink>; Forefront Research Center, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.<br /><searchLink fieldCode="AU" term="%22Kaname+T%22">Kaname T</searchLink>; Department of Genome Medicine, National Center for Child Health and Development, Tokyo 157-0074, Japan.<br /><searchLink fieldCode="AU" term="%22Nishihara+S%22">Nishihara S</searchLink>; Department of Biosciences, Graduate School of Science and Engineering, Soka University, Japan.; Glycan and Life Systems Integration Center (GaLSIC), Soka University, Hachioji 192-8577, Japan.<br /><searchLink fieldCode="AU" term="%22Yamaguchi+Y%22">Yamaguchi Y</searchLink>; Division of Structural Glycobiology, Institute of Molecular Biomembrane and Glycobiology, Tohoku Medical and Pharmaceutical University, Sendai, Miyagi 981-8558, Japan.
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  Data: <searchLink fieldCode="JN" term="%22101585369%22">Computational and structural biotechnology journal</searchLink> [Comput Struct Biotechnol J] 2025 Mar 01; Vol. 27, pp. 1034-1047. <i>Date of Electronic Publication: </i>2025 Mar 01 (<i>Print Publication: </i>2025).
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Elsevier+B%2EV%2E+on+behalf+of+Research+Network+of+Computational+and+Structural+Biotechnology%22">Elsevier B.V. on behalf of Research Network of Computational and Structural Biotechnology </searchLink><i>Country of Publication: </i>Netherlands <i>NLM ID: </i>101585369 <i>Publication Model: </i>eCollection <i>Cited Medium: </i>Print <i>ISSN: </i>2001-0370 (Print) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2220010370%22">20010370 </searchLink><i>NLM ISO Abbreviation: </i>Comput Struct Biotechnol J <i>Subsets: </i>PubMed not MEDLINE
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