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Gut mycobiome maturation and its determinants during early childhood: a comparison of ITS2 amplicon and shotgun metagenomic sequencing approaches.

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Title: Gut mycobiome maturation and its determinants during early childhood: a comparison of ITS2 amplicon and shotgun metagenomic sequencing approaches.
Authors: Heisel T; Department of Pediatrics, University of Minnesota, Minneapolis, MN, United States., Gonia S; Department of Pediatrics, University of Minnesota, Minneapolis, MN, United States., Dillon A; Department of Pediatrics, University of Minnesota, Minneapolis, MN, United States., Hoops SL; Department of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, United States., Al-Ghalith GA; Department of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, United States., Gohl D; Department of Soil, Water, and Climate, University of Minnesota Genomics Center, Minneapolis, MN, United States., Mukhopadhyay S; Children's Hospital of Philadelphia and University of Pennsylvania School of Medicine, Philadelphia, PA, United States., Puopolo K; Children's Hospital of Philadelphia and University of Pennsylvania School of Medicine, Philadelphia, PA, United States., Kennedy P; Department of Plant and Microbial Biology, University of Minnesota, St. Paul, MN, United States., Sadowsky MJ; Department of Soil, Water, and Climate, University of Minnesota, St. Paul, MN, United States., Knights D; Department of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, United States.; Biotechnology Institute, University of Minnesota, Minneapolis, MN, United States., Johnson AJ; School of Public Health, University of Minnesota, Minneapolis, MN, United States., Gerber JS; Children's Hospital of Philadelphia and University of Pennsylvania School of Medicine, Philadelphia, PA, United States., Gale CA; Department of Pediatrics, University of Minnesota, Minneapolis, MN, United States.
Source: Frontiers in microbiology [Front Microbiol] 2025 May 21; Vol. 16, pp. 1539750. Date of Electronic Publication: 2025 May 21 (Print Publication: 2025).
Publication Type: Journal Article
Journal Info: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101548977 Publication Model: eCollection Cited Medium: Print ISSN: 1664-302X (Print) Linking ISSN: 1664302X NLM ISO Abbreviation: Front Microbiol Subsets: PubMed not MEDLINE
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  Data: <searchLink fieldCode="AU" term="%22Heisel+T%22">Heisel T</searchLink>; Department of Pediatrics, University of Minnesota, Minneapolis, MN, United States.<br /><searchLink fieldCode="AU" term="%22Gonia+S%22">Gonia S</searchLink>; Department of Pediatrics, University of Minnesota, Minneapolis, MN, United States.<br /><searchLink fieldCode="AU" term="%22Dillon+A%22">Dillon A</searchLink>; Department of Pediatrics, University of Minnesota, Minneapolis, MN, United States.<br /><searchLink fieldCode="AU" term="%22Hoops+SL%22">Hoops SL</searchLink>; Department of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, United States.<br /><searchLink fieldCode="AU" term="%22Al-Ghalith+GA%22">Al-Ghalith GA</searchLink>; Department of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, United States.<br /><searchLink fieldCode="AU" term="%22Gohl+D%22">Gohl D</searchLink>; Department of Soil, Water, and Climate, University of Minnesota Genomics Center, Minneapolis, MN, United States.<br /><searchLink fieldCode="AU" term="%22Mukhopadhyay+S%22">Mukhopadhyay S</searchLink>; Children's Hospital of Philadelphia and University of Pennsylvania School of Medicine, Philadelphia, PA, United States.<br /><searchLink fieldCode="AU" term="%22Puopolo+K%22">Puopolo K</searchLink>; Children's Hospital of Philadelphia and University of Pennsylvania School of Medicine, Philadelphia, PA, United States.<br /><searchLink fieldCode="AU" term="%22Kennedy+P%22">Kennedy P</searchLink>; Department of Plant and Microbial Biology, University of Minnesota, St. Paul, MN, United States.<br /><searchLink fieldCode="AU" term="%22Sadowsky+MJ%22">Sadowsky MJ</searchLink>; Department of Soil, Water, and Climate, University of Minnesota, St. Paul, MN, United States.<br /><searchLink fieldCode="AU" term="%22Knights+D%22">Knights D</searchLink>; Department of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, United States.; Biotechnology Institute, University of Minnesota, Minneapolis, MN, United States.<br /><searchLink fieldCode="AU" term="%22Johnson+AJ%22">Johnson AJ</searchLink>; School of Public Health, University of Minnesota, Minneapolis, MN, United States.<br /><searchLink fieldCode="AU" term="%22Gerber+JS%22">Gerber JS</searchLink>; Children's Hospital of Philadelphia and University of Pennsylvania School of Medicine, Philadelphia, PA, United States.<br /><searchLink fieldCode="AU" term="%22Gale+CA%22">Gale CA</searchLink>; Department of Pediatrics, University of Minnesota, Minneapolis, MN, United States.
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  Data: <searchLink fieldCode="JN" term="%22101548977%22">Frontiers in microbiology</searchLink> [Front Microbiol] 2025 May 21; Vol. 16, pp. 1539750. <i>Date of Electronic Publication: </i>2025 May 21 (<i>Print Publication: </i>2025).
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