View in EDS

Beyond benchmarking: an expert-guided consensus approach to spatially aware clustering.

Saved in:
Bibliographic Details
Title: Beyond benchmarking: an expert-guided consensus approach to spatially aware clustering.
Authors: Sun J; Biomedical Data Science Center, Centre Hospitalier Universitaire Vaudois, Rue du Bugnon 21, 1011 Lausanne, Switzerland., Biharie K; Department of Human Genetics, Leiden University Medical Center, Einthovenweg 20, 2333 ZC Leiden, Netherlands.; Delft Bioinformatics Lab, Delft University of Technology, Van Mourik Broekmanweg 6, 2628 XE Delft, Netherlands., Cai P; Department of Molecular Life Sciences and SIB Swiss Institute of Bioinformatics, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland., Müller-Bötticher N; Berlin Institute of Health at Charité - Universitätsmedizin Berlin, Center of Digital Health, Charitéplatz 1, 10117 Berlin, Germany., Kiessling P; Department of Nephrology, Rheumatology, and Clinical Immunology, University Hospital RWTH Aachen, Pauwelsstraße 30, Aachen, Germany., Turner MA; Allen Institute for Brain Science, 615 Westlake Ave N, Seattle, WA, USA 98109., Dam SH; DTU Health Tech, Technical University of Denmark, Ørsteds Plads, Building 345C, 2800, Kgs. Lyngby, Denmark.; LEO Foundation Skin Immunology Research Center, Department of Immunology and Microbiology, University of Copenhagen, Blegdamsvej 3B, 2200, Copenhagen N, Denmark., Heyl F; German Cancer Research Center (DKFZ), Division of Computational Genomics and Systems Genetics, Im Neuenheimer Feld 280, 69120 Heidelberg, Germany.; The German Human Genome-Phenome Archive (GHGA), Im Neuenheimer Feld 280, 69120 Heidelberg, Germany., Kathirchelvan S; Department of Molecular Life Sciences and SIB Swiss Institute of Bioinformatics, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland., Emons M; Department of Molecular Life Sciences and SIB Swiss Institute of Bioinformatics, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland., Gunz S; Department of Molecular Life Sciences and SIB Swiss Institute of Bioinformatics, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland., Twardziok S; Berlin Institute of Health at Charité - Universitätsmedizin Berlin, Center of Digital Health, Charitéplatz 1, 10117 Berlin, Germany., El-Heliebi A; Division of Cell Biology, Histology and Embryology, Gottfried Schatz Research Center, Medical University of Graz, Graz, Austria., Zacharias M; Diagnostic and Research Institute of Pathology, Medical University of Graz, Graz, Austria., Eils R; Berlin Institute of Health at Charité - Universitätsmedizin Berlin, Center of Digital Health, Charitéplatz 1, 10117 Berlin, Germany., Reinders M; Delft Bioinformatics Lab, Delft University of Technology, Van Mourik Broekmanweg 6, 2628 XE Delft, Netherlands., Gottardo R; Biomedical Data Science Center, Centre Hospitalier Universitaire Vaudois, Rue du Bugnon 21, 1011 Lausanne, Switzerland., Kuppe C; Department of Nephrology, Rheumatology, and Clinical Immunology, University Hospital RWTH Aachen, Pauwelsstraße 30, Aachen, Germany., Long B; Allen Institute for Brain Science, 615 Westlake Ave N, Seattle, WA, USA 98109., Mahfouz A; Department of Human Genetics, Leiden University Medical Center, Einthovenweg 20, 2333 ZC Leiden, Netherlands.; Delft Bioinformatics Lab, Delft University of Technology, Van Mourik Broekmanweg 6, 2628 XE Delft, Netherlands., Robinson MD; Department of Molecular Life Sciences and SIB Swiss Institute of Bioinformatics, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland., Ishaque N; Berlin Institute of Health at Charité - Universitätsmedizin Berlin, Center of Digital Health, Charitéplatz 1, 10117 Berlin, Germany.
Corporate Authors: SpaceHack 2.0 participants
Source: BioRxiv : the preprint server for biology [bioRxiv] 2025 Nov 20. Date of Electronic Publication: 2025 Nov 20.
Publication Type: Journal Article; Preprint
Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
FullText Text:
  Availability: 0
Header DbId: mdl
DbLabel: MEDLINE Ultimate
An: 40667282
AccessLevel: 2
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
IllustrationInfo
Items – Name: Title
  Label: Title
  Group: Ti
  Data: Beyond benchmarking: an expert-guided consensus approach to spatially aware clustering.
– Name: Author
  Label: Authors
  Group: Au
  Data: <searchLink fieldCode="AU" term="%22Sun+J%22">Sun J</searchLink>; Biomedical Data Science Center, Centre Hospitalier Universitaire Vaudois, Rue du Bugnon 21, 1011 Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Biharie+K%22">Biharie K</searchLink>; Department of Human Genetics, Leiden University Medical Center, Einthovenweg 20, 2333 ZC Leiden, Netherlands.; Delft Bioinformatics Lab, Delft University of Technology, Van Mourik Broekmanweg 6, 2628 XE Delft, Netherlands.<br /><searchLink fieldCode="AU" term="%22Cai+P%22">Cai P</searchLink>; Department of Molecular Life Sciences and SIB Swiss Institute of Bioinformatics, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.<br /><searchLink fieldCode="AU" term="%22Müller-Bötticher+N%22">Müller-Bötticher N</searchLink>; Berlin Institute of Health at Charité - Universitätsmedizin Berlin, Center of Digital Health, Charitéplatz 1, 10117 Berlin, Germany.<br /><searchLink fieldCode="AU" term="%22Kiessling+P%22">Kiessling P</searchLink>; Department of Nephrology, Rheumatology, and Clinical Immunology, University Hospital RWTH Aachen, Pauwelsstraße 30, Aachen, Germany.<br /><searchLink fieldCode="AU" term="%22Turner+MA%22">Turner MA</searchLink>; Allen Institute for Brain Science, 615 Westlake Ave N, Seattle, WA, USA 98109.<br /><searchLink fieldCode="AU" term="%22Dam+SH%22">Dam SH</searchLink>; DTU Health Tech, Technical University of Denmark, Ørsteds Plads, Building 345C, 2800, Kgs. Lyngby, Denmark.; LEO Foundation Skin Immunology Research Center, Department of Immunology and Microbiology, University of Copenhagen, Blegdamsvej 3B, 2200, Copenhagen N, Denmark.<br /><searchLink fieldCode="AU" term="%22Heyl+F%22">Heyl F</searchLink>; German Cancer Research Center (DKFZ), Division of Computational Genomics and Systems Genetics, Im Neuenheimer Feld 280, 69120 Heidelberg, Germany.; The German Human Genome-Phenome Archive (GHGA), Im Neuenheimer Feld 280, 69120 Heidelberg, Germany.<br /><searchLink fieldCode="AU" term="%22Kathirchelvan+S%22">Kathirchelvan S</searchLink>; Department of Molecular Life Sciences and SIB Swiss Institute of Bioinformatics, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.<br /><searchLink fieldCode="AU" term="%22Emons+M%22">Emons M</searchLink>; Department of Molecular Life Sciences and SIB Swiss Institute of Bioinformatics, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.<br /><searchLink fieldCode="AU" term="%22Gunz+S%22">Gunz S</searchLink>; Department of Molecular Life Sciences and SIB Swiss Institute of Bioinformatics, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.<br /><searchLink fieldCode="AU" term="%22Twardziok+S%22">Twardziok S</searchLink>; Berlin Institute of Health at Charité - Universitätsmedizin Berlin, Center of Digital Health, Charitéplatz 1, 10117 Berlin, Germany.<br /><searchLink fieldCode="AU" term="%22El-Heliebi+A%22">El-Heliebi A</searchLink>; Division of Cell Biology, Histology and Embryology, Gottfried Schatz Research Center, Medical University of Graz, Graz, Austria.<br /><searchLink fieldCode="AU" term="%22Zacharias+M%22">Zacharias M</searchLink>; Diagnostic and Research Institute of Pathology, Medical University of Graz, Graz, Austria.<br /><searchLink fieldCode="AU" term="%22Eils+R%22">Eils R</searchLink>; Berlin Institute of Health at Charité - Universitätsmedizin Berlin, Center of Digital Health, Charitéplatz 1, 10117 Berlin, Germany.<br /><searchLink fieldCode="AU" term="%22Reinders+M%22">Reinders M</searchLink>; Delft Bioinformatics Lab, Delft University of Technology, Van Mourik Broekmanweg 6, 2628 XE Delft, Netherlands.<br /><searchLink fieldCode="AU" term="%22Gottardo+R%22">Gottardo R</searchLink>; Biomedical Data Science Center, Centre Hospitalier Universitaire Vaudois, Rue du Bugnon 21, 1011 Lausanne, Switzerland.<br /><searchLink fieldCode="AU" term="%22Kuppe+C%22">Kuppe C</searchLink>; Department of Nephrology, Rheumatology, and Clinical Immunology, University Hospital RWTH Aachen, Pauwelsstraße 30, Aachen, Germany.<br /><searchLink fieldCode="AU" term="%22Long+B%22">Long B</searchLink>; Allen Institute for Brain Science, 615 Westlake Ave N, Seattle, WA, USA 98109.<br /><searchLink fieldCode="AU" term="%22Mahfouz+A%22">Mahfouz A</searchLink>; Department of Human Genetics, Leiden University Medical Center, Einthovenweg 20, 2333 ZC Leiden, Netherlands.; Delft Bioinformatics Lab, Delft University of Technology, Van Mourik Broekmanweg 6, 2628 XE Delft, Netherlands.<br /><searchLink fieldCode="AU" term="%22Robinson+MD%22">Robinson MD</searchLink>; Department of Molecular Life Sciences and SIB Swiss Institute of Bioinformatics, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.<br /><searchLink fieldCode="AU" term="%22Ishaque+N%22">Ishaque N</searchLink>; Berlin Institute of Health at Charité - Universitätsmedizin Berlin, Center of Digital Health, Charitéplatz 1, 10117 Berlin, Germany.
– Name: AuthorCorporate
  Label: Corporate Authors
  Group: Au
  Data: <searchLink fieldCode="CA" term="%22SpaceHack+2%2E0+participants%22">SpaceHack 2.0 participants</searchLink>
– Name: TitleSource
  Label: Source
  Group: Src
  Data: <searchLink fieldCode="JN" term="%22101680187%22">BioRxiv : the preprint server for biology</searchLink> [bioRxiv] 2025 Nov 20. <i>Date of Electronic Publication: </i>2025 Nov 20.
– Name: TypePub
  Label: Publication Type
  Group: TypPub
  Data: Journal Article; Preprint
– Name: TitleSource
  Label: Journal Info
  Group: Src
  Data: <i>Country of Publication: </i>United States <i>NLM ID: </i>101680187 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>2692-8205 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2226928205%22">26928205 </searchLink><i>NLM ISO Abbreviation: </i>bioRxiv <i>Subsets: </i>PubMed not MEDLINE
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=40667282
RecordInfo BibRecord:
  BibEntity:
    Identifiers:
      – Type: doi
        Value: 10.1101/2025.06.23.660861
    Languages:
      – Code: eng
        Text: English
    Titles:
      – TitleFull: Beyond benchmarking: an expert-guided consensus approach to spatially aware clustering.
        Type: main
  BibRelationships:
    HasContributorRelationships:
      – PersonEntity:
          Name:
            NameFull: Sun J
      – PersonEntity:
          Name:
            NameFull: Biharie K
      – PersonEntity:
          Name:
            NameFull: Cai P
      – PersonEntity:
          Name:
            NameFull: Müller-Bötticher N
      – PersonEntity:
          Name:
            NameFull: Kiessling P
      – PersonEntity:
          Name:
            NameFull: Turner MA
      – PersonEntity:
          Name:
            NameFull: Dam SH
      – PersonEntity:
          Name:
            NameFull: Heyl F
      – PersonEntity:
          Name:
            NameFull: Kathirchelvan S
      – PersonEntity:
          Name:
            NameFull: Emons M
      – PersonEntity:
          Name:
            NameFull: Gunz S
      – PersonEntity:
          Name:
            NameFull: Twardziok S
      – PersonEntity:
          Name:
            NameFull: El-Heliebi A
      – PersonEntity:
          Name:
            NameFull: Zacharias M
      – PersonEntity:
          Name:
            NameFull: Eils R
      – PersonEntity:
          Name:
            NameFull: Reinders M
      – PersonEntity:
          Name:
            NameFull: Gottardo R
      – PersonEntity:
          Name:
            NameFull: Kuppe C
      – PersonEntity:
          Name:
            NameFull: Long B
      – PersonEntity:
          Name:
            NameFull: Mahfouz A
      – PersonEntity:
          Name:
            NameFull: Robinson MD
      – PersonEntity:
          Name:
            NameFull: Ishaque N
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 20
              M: 11
              Text: 2025 Nov 20
              Type: published
              Y: 2025
          Identifiers:
            – Type: issn-electronic
              Value: 2692-8205
          Titles:
            – TitleFull: BioRxiv : the preprint server for biology
              Type: main
ResultId 1