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The Data Distillery: A Graph Framework for Semantic Integration and Querying of Biomedical Data.

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Title: The Data Distillery: A Graph Framework for Semantic Integration and Querying of Biomedical Data.
Authors: Ahooyi TM; Department of Biomedical and Health Informatics, The Children's Hospital of Philadelphia, Philadelphia PA USA., Stear B; Department of Biomedical and Health Informatics, The Children's Hospital of Philadelphia, Philadelphia PA USA., Simmons JA; Department of Biomedical Informatics, University of Pittsburgh School of Medicine, Pittsburgh PA USA., Metzger VT; Department of Internal Medicine, Division of Translational Informatics, University of New Mexico Health Sciences Center, University of New Mexico NM USA., Kumar P; Department of Internal Medicine, Division of Translational Informatics, University of New Mexico Health Sciences Center, University of New Mexico NM USA., Evangelista JE; Department of Pharmacological Sciences; Mount Sinai Center for Bioinformatics, Icahn School of Medicine at Mount Sinai, New York NY USA., Clarke DJB; Department of Pharmacological Sciences; Mount Sinai Center for Bioinformatics, Icahn School of Medicine at Mount Sinai, New York NY USA., Xie Z; Department of Pharmacological Sciences; Mount Sinai Center for Bioinformatics, Icahn School of Medicine at Mount Sinai, New York NY USA., Kim H; Department of Pharmacological Sciences; Mount Sinai Center for Bioinformatics, Icahn School of Medicine at Mount Sinai, New York NY USA., Jenkins SL; Department of Pharmacological Sciences; Mount Sinai Center for Bioinformatics, Icahn School of Medicine at Mount Sinai, New York NY USA., Maurya MR; Department of Bioengineering, University of California San Diego, San Diego CA USA., Ramachandran S; Department of Bioengineering, University of California San Diego, San Diego CA USA., Fahy E; Department of Bioengineering, University of California San Diego, San Diego CA USA., Gillespie TH; Department of Neuroscience, School of Medicine, University of California San Diego, San Diego CA USA., Imam FT; Department of Neuroscience, School of Medicine, University of California San Diego, San Diego CA USA., Kokash N; Institute of Informatics, University of Amsterdam, the Netherlands., Roth ME; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston TX USA., Fullem R; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston TX USA., Jevtic D; Persida Bio, Brooklyn NY USA., Mihajlovic A; Persida Bio, Brooklyn NY USA., Tiemeyer M; Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, USA., Bakker C; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA., Schroeder AJ; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA., Markowski J; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA., Nedzel J; Broad Institute of MIT and Harvard, Cambridge MA USA., Hill DD; Department of Biomedical and Health Informatics, The Children's Hospital of Philadelphia, Philadelphia PA USA., Terry J; Department of Biomedical and Health Informatics, The Children's Hospital of Philadelphia, Philadelphia PA USA., Nemarich C; Center for Data Driven Discovery, The Children's Hospital of Philadelphia, Philadelphia PA USA., Boline J; Informed Minds Inc. Walnut Creek, CA USA., Park PJ; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA., Ardlie KG; Broad Institute of MIT and Harvard, Cambridge MA USA., Vora J; Department of Biochemistry and Molecular Medicine, George Washington University, Washington DC USA., Mazumder R; Department of Biochemistry and Molecular Medicine, George Washington University, Washington DC USA., Ranzinger R; Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, USA., de Bono B; Auckland Bioengineering Institute, University of Auckland, Auckland NZ., Subramaniam S; Department of Bioengineering, University of California San Diego, San Diego CA USA., Grethe JS; Department of Neuroscience, School of Medicine, University of California San Diego, San Diego CA USA., Yang JJ; Department of Internal Medicine, Division of Translational Informatics, University of New Mexico Health Sciences Center, University of New Mexico NM USA., Lambert CG; Department of Internal Medicine, Division of Translational Informatics, University of New Mexico Health Sciences Center, University of New Mexico NM USA., Resnick A; Center for Data Driven Discovery, The Children's Hospital of Philadelphia, Philadelphia PA USA.; Department of Pediatrics, University of Pennsylvania Perelman School of Medicine, Philadelphia PA USA., Milosavljevic A; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston TX USA., Ma'ayan A; Department of Pharmacological Sciences; Mount Sinai Center for Bioinformatics, Icahn School of Medicine at Mount Sinai, New York NY USA., Silverstein JC; Department of Biomedical Informatics, University of Pittsburgh School of Medicine, Pittsburgh PA USA., Taylor DM; Department of Biomedical and Health Informatics, The Children's Hospital of Philadelphia, Philadelphia PA USA.; Department of Pediatrics, University of Pennsylvania Perelman School of Medicine, Philadelphia PA USA.
Source: BioRxiv : the preprint server for biology [bioRxiv] 2025 Oct 16. Date of Electronic Publication: 2025 Oct 16.
Publication Type: Journal Article; Preprint
Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
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