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The systematic assessment of completeness of public metadata accompanying omics studies in the Gene Expression Omnibus data repository.

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Title: The systematic assessment of completeness of public metadata accompanying omics studies in the Gene Expression Omnibus data repository.
Authors: Huang YN; Department of Clinical Pharmacy, Alfred E. Mann School of Pharmacy and Pharmaceutical Sciences, University of Southern California, Los Angeles, CA, 90089, USA., Jaiswal PV; Department of Clinical Pharmacy, Alfred E. Mann School of Pharmacy and Pharmaceutical Sciences, University of Southern California, Los Angeles, CA, 90089, USA., Rajes A; Department of Pharmacology and Pharmaceutical Sciences, Alfred E. Mann School of Pharmacy, University of Southern California, Los Angeles, CA, 90089, USA., Yadav A; Department of Pharmacology and Pharmaceutical Sciences, Alfred E. Mann School of Pharmacy, University of Southern California, Los Angeles, CA, 90089, USA., Yu D; Department of Quantitative and Computational Biology, Dana and David Dornsife College of Letters, Arts and Sciences, University of Southern California, Los Angeles, CA, USA., Liu F; Department of Quantitative and Computational Biology, Dana and David Dornsife College of Letters, Arts and Sciences, University of Southern California, Los Angeles, CA, USA., Scheg G; Department of Quantitative and Computational Biology, Dana and David Dornsife College of Letters, Arts and Sciences, University of Southern California, Los Angeles, CA, USA., Shih E; Department of Quantitative and Computational Biology, Dana and David Dornsife College of Letters, Arts and Sciences, University of Southern California, Los Angeles, CA, USA., Boldirev G; Department of Computer Science, College of Arts and Sciences, Georgia State University, Atlanta, GA, 30303, USA., Nakashidze I; Faculty of Natural Sciences and Health Care, Batumi Shota Rustaveli State University, Batumi, 6010, Georgia., Sarkar A; School of Computing and Electrical Engineering, Indian Institute of Technology Mandi, North Campus, Kamand, Mandi, HP, 175005, India., Mehta JH; Department of Pharmacology and Pharmaceutical Sciences, Alfred E. Mann School of Pharmacy, University of Southern California, Los Angeles, CA, 90089, USA., Wang K; Department of Translational Genomics, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA., Patel KK; Department of Clinical Pharmacy, Alfred E. Mann School of Pharmacy and Pharmaceutical Sciences, University of Southern California, Los Angeles, CA, 90089, USA., Mirza MAB; Department of Computer Science and Engineering, University of Bridgeport, Bridgeport, CT, 06604, USA., Hapani KC; Department of Clinical Pharmacy, Alfred E. Mann School of Pharmacy and Pharmaceutical Sciences, University of Southern California, Los Angeles, CA, 90089, USA., Peng Q; Department of Pharmacology and Pharmaceutical Sciences, Alfred E. Mann School of Pharmacy, University of Southern California, Los Angeles, CA, 90089, USA., Ayyala R; Department of Quantitative and Computational Biology, Dana and David Dornsife College of Letters, Arts and Sciences, University of Southern California, Los Angeles, CA, USA., Guo R; Department of Pharmacology and Pharmaceutical Sciences, Alfred E. Mann School of Pharmacy, University of Southern California, Los Angeles, CA, 90089, USA., Kapur S; Seven Lakes High School, 9251 South Fry Road, Katy, TX, 77494, USA., Ramesh T; Center for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, 02125, USA., Ciorbă D; Department of Computers, Informatics and Microelectronics, Technical University of Moldova, Chisinau, 2045, Moldova., Munteanu V; Department of Computers, Informatics and Microelectronics, Technical University of Moldova, Chisinau, 2045, Moldova.; Department of Biological and Morphofunctional Sciences, College of Medicine and Biological Sciences, University of Suceava, Suceava, 720229, Romania., Bostan V; Department of Computers, Informatics and Microelectronics, Technical University of Moldova, Chisinau, 2045, Moldova., Dimian M; Department of Computers, Electronics and Automation, Stefan Cel Mare University of Suceava, Suceava, 720229, Romania., Abedalthagafi MS; Department of Pathology and Laboratory Medicine, Tufts Medical Centerand , Tufts University School of Medicine, Boston, MA, 02111, USA. Malak.Althgafi@tuftsmedicalcenter.org.; Department of Neurosurgery, Tufts Medical Centerand , Tufts University School of Medicine, Boston, MA, 02111, USA. Malak.Althgafi@tuftsmedicalcenter.org., Mangul S; Department of Clinical Pharmacy, Alfred E. Mann School of Pharmacy and Pharmaceutical Sciences, University of Southern California, Los Angeles, CA, 90089, USA. serghei.mangul@gmail.com.; Department of Computers, Informatics and Microelectronics, Technical University of Moldova, Chisinau, 2045, Moldova. serghei.mangul@gmail.com.; Department of Biological and Morphofunctional Sciences, College of Medicine and Biological Sciences, Stefan Cel Mare University of Suceava, Suceava, 720229, Romania. serghei.mangul@gmail.com.; Sage Bionetworks, Seattle, WA, USA. serghei.mangul@gmail.com.
Source: Genome biology [Genome Biol] 2025 Sep 09; Vol. 26 (1), pp. 274. Date of Electronic Publication: 2025 Sep 09.
Publication Type: Journal Article
Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: The systematic assessment of completeness of public metadata accompanying omics studies in the Gene Expression Omnibus data repository.
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  Data: <searchLink fieldCode="AU" term="%22Huang+YN%22">Huang YN</searchLink>; Department of Clinical Pharmacy, Alfred E. Mann School of Pharmacy and Pharmaceutical Sciences, University of Southern California, Los Angeles, CA, 90089, USA.<br /><searchLink fieldCode="AU" term="%22Jaiswal+PV%22">Jaiswal PV</searchLink>; Department of Clinical Pharmacy, Alfred E. Mann School of Pharmacy and Pharmaceutical Sciences, University of Southern California, Los Angeles, CA, 90089, USA.<br /><searchLink fieldCode="AU" term="%22Rajes+A%22">Rajes A</searchLink>; Department of Pharmacology and Pharmaceutical Sciences, Alfred E. Mann School of Pharmacy, University of Southern California, Los Angeles, CA, 90089, USA.<br /><searchLink fieldCode="AU" term="%22Yadav+A%22">Yadav A</searchLink>; Department of Pharmacology and Pharmaceutical Sciences, Alfred E. 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Mann School of Pharmacy and Pharmaceutical Sciences, University of Southern California, Los Angeles, CA, 90089, USA.<br /><searchLink fieldCode="AU" term="%22Peng+Q%22">Peng Q</searchLink>; Department of Pharmacology and Pharmaceutical Sciences, Alfred E. Mann School of Pharmacy, University of Southern California, Los Angeles, CA, 90089, USA.<br /><searchLink fieldCode="AU" term="%22Ayyala+R%22">Ayyala R</searchLink>; Department of Quantitative and Computational Biology, Dana and David Dornsife College of Letters, Arts and Sciences, University of Southern California, Los Angeles, CA, USA.<br /><searchLink fieldCode="AU" term="%22Guo+R%22">Guo R</searchLink>; Department of Pharmacology and Pharmaceutical Sciences, Alfred E. Mann School of Pharmacy, University of Southern California, Los Angeles, CA, 90089, USA.<br /><searchLink fieldCode="AU" term="%22Kapur+S%22">Kapur S</searchLink>; Seven Lakes High School, 9251 South Fry Road, Katy, TX, 77494, USA.<br /><searchLink fieldCode="AU" term="%22Ramesh+T%22">Ramesh T</searchLink>; Center for Personalized Cancer Therapy, University of Massachusetts Boston, Boston, MA, 02125, USA.<br /><searchLink fieldCode="AU" term="%22Ciorbă+D%22">Ciorbă D</searchLink>; Department of Computers, Informatics and Microelectronics, Technical University of Moldova, Chisinau, 2045, Moldova.<br /><searchLink fieldCode="AU" term="%22Munteanu+V%22">Munteanu V</searchLink>; Department of Computers, Informatics and Microelectronics, Technical University of Moldova, Chisinau, 2045, Moldova.; Department of Biological and Morphofunctional Sciences, College of Medicine and Biological Sciences, University of Suceava, Suceava, 720229, Romania.<br /><searchLink fieldCode="AU" term="%22Bostan+V%22">Bostan V</searchLink>; Department of Computers, Informatics and Microelectronics, Technical University of Moldova, Chisinau, 2045, Moldova.<br /><searchLink fieldCode="AU" term="%22Dimian+M%22">Dimian M</searchLink>; Department of Computers, Electronics and Automation, Stefan Cel Mare University of Suceava, Suceava, 720229, Romania.<br /><searchLink fieldCode="AU" term="%22Abedalthagafi+MS%22">Abedalthagafi MS</searchLink>; Department of Pathology and Laboratory Medicine, Tufts Medical Centerand , Tufts University School of Medicine, Boston, MA, 02111, USA. Malak.Althgafi@tuftsmedicalcenter.org.; Department of Neurosurgery, Tufts Medical Centerand , Tufts University School of Medicine, Boston, MA, 02111, USA. Malak.Althgafi@tuftsmedicalcenter.org.<br /><searchLink fieldCode="AU" term="%22Mangul+S%22">Mangul S</searchLink>; Department of Clinical Pharmacy, Alfred E. Mann School of Pharmacy and Pharmaceutical Sciences, University of Southern California, Los Angeles, CA, 90089, USA. serghei.mangul@gmail.com.; Department of Computers, Informatics and Microelectronics, Technical University of Moldova, Chisinau, 2045, Moldova. serghei.mangul@gmail.com.; Department of Biological and Morphofunctional Sciences, College of Medicine and Biological Sciences, Stefan Cel Mare University of Suceava, Suceava, 720229, Romania. serghei.mangul@gmail.com.; Sage Bionetworks, Seattle, WA, USA. serghei.mangul@gmail.com.
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