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Exploring genome, transcriptome, and microbiome interactions related to feed efficiency and methane emissions in Bos indicus through multi-omics network analysis.

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Title: Exploring genome, transcriptome, and microbiome interactions related to feed efficiency and methane emissions in Bos indicus through multi-omics network analysis.
Authors: Cardoso TF; Embrapa Southeast Livestock, São Carlos, São Paulo, Brazil. taina.cardoso@colaborador.embrapa.br., Bruscadin JJ; Embrapa Southeast Livestock, São Carlos, São Paulo, Brazil.; Federal University of São Carlos, São Carlos, São Paulo, Brazil., Afonso J; Embrapa Southeast Livestock, São Carlos, São Paulo, Brazil., Conteville LC; Embrapa Southeast Livestock, São Carlos, São Paulo, Brazil., Andrade BGN; Department of Computer Sciences, Munster Technological University, Cork, Ireland., Malheiros JM; Embrapa Southeast Livestock, São Carlos, São Paulo, Brazil., Fernandes AC; Department of Animal Science, 'Luiz de Queiroz' College of Agriculture, University of São Paulo/ESALQ, Piracicaba, São Paulo, Brazil.; Laboratory of Molecular Morphophysiology and Development (LMMD), Department of Veterinary Medicine, Faculty of Animal Science and Food Engineering (FZEA), University of São Paulo (USP), Pirassununga, Brazil., Diniz WJS; Department of Animal Sciences, Auburn University, Auburn, AL, USA., Banerjee P; Department of Animal Sciences, Auburn University, Auburn, AL, USA., de Oliveira PSN; Embrapa Southeast Livestock, São Carlos, São Paulo, Brazil.; Federal University of São Carlos, São Carlos, São Paulo, Brazil., Zerlotini A; Embrapa Agricultural Informatics, Campinas, São Paulo, Brazil., Mourão GB; Department of Animal Science, 'Luiz de Queiroz' College of Agriculture, University of São Paulo/ESALQ, Piracicaba, São Paulo, Brazil., Coutinho LL; Department of Animal Science, 'Luiz de Queiroz' College of Agriculture, University of São Paulo/ESALQ, Piracicaba, São Paulo, Brazil., Regitano LCA; Embrapa Southeast Livestock, São Carlos, São Paulo, Brazil. luciana.regitano@embrapa.br.
Source: Mammalian genome : official journal of the International Mammalian Genome Society [Mamm Genome] 2025 Dec; Vol. 36 (4), pp. 1153-1172. Date of Electronic Publication: 2025 Sep 25.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
Journal Info: Publisher: Springer-Verlag Country of Publication: United States NLM ID: 9100916 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-1777 (Electronic) Linking ISSN: 09388990 NLM ISO Abbreviation: Mamm Genome Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Exploring genome, transcriptome, and microbiome interactions related to feed efficiency and methane emissions in Bos indicus through multi-omics network analysis.
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  Data: <searchLink fieldCode="AU" term="%22Cardoso+TF%22">Cardoso TF</searchLink>; Embrapa Southeast Livestock, São Carlos, São Paulo, Brazil. taina.cardoso@colaborador.embrapa.br.<br /><searchLink fieldCode="AU" term="%22Bruscadin+JJ%22">Bruscadin JJ</searchLink>; Embrapa Southeast Livestock, São Carlos, São Paulo, Brazil.; Federal University of São Carlos, São Carlos, São Paulo, Brazil.<br /><searchLink fieldCode="AU" term="%22Afonso+J%22">Afonso J</searchLink>; Embrapa Southeast Livestock, São Carlos, São Paulo, Brazil.<br /><searchLink fieldCode="AU" term="%22Conteville+LC%22">Conteville LC</searchLink>; Embrapa Southeast Livestock, São Carlos, São Paulo, Brazil.<br /><searchLink fieldCode="AU" term="%22Andrade+BGN%22">Andrade BGN</searchLink>; Department of Computer Sciences, Munster Technological University, Cork, Ireland.<br /><searchLink fieldCode="AU" term="%22Malheiros+JM%22">Malheiros JM</searchLink>; Embrapa Southeast Livestock, São Carlos, São Paulo, Brazil.<br /><searchLink fieldCode="AU" term="%22Fernandes+AC%22">Fernandes AC</searchLink>; Department of Animal Science, 'Luiz de Queiroz' College of Agriculture, University of São Paulo/ESALQ, Piracicaba, São Paulo, Brazil.; Laboratory of Molecular Morphophysiology and Development (LMMD), Department of Veterinary Medicine, Faculty of Animal Science and Food Engineering (FZEA), University of São Paulo (USP), Pirassununga, Brazil.<br /><searchLink fieldCode="AU" term="%22Diniz+WJS%22">Diniz WJS</searchLink>; Department of Animal Sciences, Auburn University, Auburn, AL, USA.<br /><searchLink fieldCode="AU" term="%22Banerjee+P%22">Banerjee P</searchLink>; Department of Animal Sciences, Auburn University, Auburn, AL, USA.<br /><searchLink fieldCode="AU" term="%22de+Oliveira+PSN%22">de Oliveira PSN</searchLink>; Embrapa Southeast Livestock, São Carlos, São Paulo, Brazil.; Federal University of São Carlos, São Carlos, São Paulo, Brazil.<br /><searchLink fieldCode="AU" term="%22Zerlotini+A%22">Zerlotini A</searchLink>; Embrapa Agricultural Informatics, Campinas, São Paulo, Brazil.<br /><searchLink fieldCode="AU" term="%22Mourão+GB%22">Mourão GB</searchLink>; Department of Animal Science, 'Luiz de Queiroz' College of Agriculture, University of São Paulo/ESALQ, Piracicaba, São Paulo, Brazil.<br /><searchLink fieldCode="AU" term="%22Coutinho+LL%22">Coutinho LL</searchLink>; Department of Animal Science, 'Luiz de Queiroz' College of Agriculture, University of São Paulo/ESALQ, Piracicaba, São Paulo, Brazil.<br /><searchLink fieldCode="AU" term="%22Regitano+LCA%22">Regitano LCA</searchLink>; Embrapa Southeast Livestock, São Carlos, São Paulo, Brazil. luciana.regitano@embrapa.br.
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  Data: <searchLink fieldCode="JN" term="%229100916%22">Mammalian genome : official journal of the International Mammalian Genome Society</searchLink> [Mamm Genome] 2025 Dec; Vol. 36 (4), pp. 1153-1172. <i>Date of Electronic Publication: </i>2025 Sep 25.
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  Data: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Springer-Verlag%22">Springer-Verlag </searchLink><i>Country of Publication: </i>United States <i>NLM ID: </i>9100916 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1432-1777 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2209388990%22">09388990 </searchLink><i>NLM ISO Abbreviation: </i>Mamm Genome <i>Subsets: </i>MEDLINE
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        Text: English
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              M: 12
              Text: 2025 Dec
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