View in EDS HTML Full Text PDF Full Text

De novo annotation reveals transcriptomic complexity across the hexaploid wheat pan-genome.

Saved in:
Bibliographic Details
Title: De novo annotation reveals transcriptomic complexity across the hexaploid wheat pan-genome.
Authors: White B; Earlham Institute, Norwich Research Park, Norwich, UK., Lux T; PGSB Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany., Rusholme-Pilcher R; Earlham Institute, Norwich Research Park, Norwich, UK., Juhász A; Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, School of Science, Edith Cowan University, Joondalup, WA, Australia., Kaithakottil G; Earlham Institute, Norwich Research Park, Norwich, UK., Duncan S; Earlham Institute, Norwich Research Park, Norwich, UK.; John Innes Centre, Norwich Research Park, Norwich, UK., Simmonds J; John Innes Centre, Norwich Research Park, Norwich, UK., Rees H; Earlham Institute, Norwich Research Park, Norwich, UK., Wright J; Earlham Institute, Norwich Research Park, Norwich, UK., Colmer J; Earlham Institute, Norwich Research Park, Norwich, UK., Ward S; Earlham Institute, Norwich Research Park, Norwich, UK., Joynson R; Earlham Institute, Norwich Research Park, Norwich, UK.; Limagrain Europe, Clermont-Ferrand, Auvergne-Rhône-Alpes, France., Coombes B; Earlham Institute, Norwich Research Park, Norwich, UK., Irish N; Earlham Institute, Norwich Research Park, Norwich, UK., Henderson S; Earlham Institute, Norwich Research Park, Norwich, UK., Barker T; Earlham Institute, Norwich Research Park, Norwich, UK., Chapman H; Earlham Institute, Norwich Research Park, Norwich, UK., Catchpole L; Earlham Institute, Norwich Research Park, Norwich, UK., Gharbi K; Earlham Institute, Norwich Research Park, Norwich, UK., Bose U; Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, School of Science, Edith Cowan University, Joondalup, WA, Australia.; CSIRO Agriculture and Food, St Lucia, QLD, Australia., Okada M; Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland.; Kihara Institute for Biological Research, Yokohama City University, Yokohama, Japan.; Graduate School of Science and Technology, Niigata University, Niigata, Japan., Handa H; Graduate School of Life and Environmental Sciences, Kyoto Prefectural University, Kyoto, Japan., Nasuda S; Graduate School of Agriculture, Kyoto University, Kyoto, Japan., Shimizu KK; Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland.; Kihara Institute for Biological Research, Yokohama City University, Yokohama, Japan., Gundlach H; PGSB Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany., Lang D; PGSB Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany.; Bundeswehr Institute of Microbiology, Munich, Germany., Naamati G; EMBL-EBI, Wellcome Genome Campus, Hinxton, Cambridgeshire, UK., Legg EJ; Syngenta Crop Protection, Research Triangle Park, Durham, NC, USA., Bharti AK; Syngenta Crop Protection, Research Triangle Park, Durham, NC, USA., Colgrave ML; Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, School of Science, Edith Cowan University, Joondalup, WA, Australia.; CSIRO Agriculture and Food, St Lucia, QLD, Australia., Haerty W; Earlham Institute, Norwich Research Park, Norwich, UK., Uauy C; John Innes Centre, Norwich Research Park, Norwich, UK., Swarbreck D; Earlham Institute, Norwich Research Park, Norwich, UK., Borrill P; John Innes Centre, Norwich Research Park, Norwich, UK., Poland JA; Plant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia., Krattinger SG; Plant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia., Stein N; Crop Plant Genetics, Institute of Agricultural and Nutritional Sciences, Martin Luther University of Halle-Wittenberg, Halle (Saale), Germany.; Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany., Mayer KFX; PGSB Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany.; School of Life Sciences, Technical University Munich, Freising, Germany., Pozniak C; Crop Development Centre, The University of Saskatchewan, Saskatoon, SK, Canada., Spannagl M; PGSB Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany. manuel.spannagl@helmholtz-muenchen.de.; Centre for Crop & Food Innovation, Food Futures Institute, Murdoch University, Murdoch, WA, Australia. manuel.spannagl@helmholtz-muenchen.de., Hall A; Earlham Institute, Norwich Research Park, Norwich, UK. anthony.hall@earlham.ac.uk.; School of Biological Sciences, University of East Anglia, Norwich, UK. anthony.hall@earlham.ac.uk.
Corporate Authors: 10+ Wheat Genome Project
Source: Nature communications [Nat Commun] 2025 Oct 06; Vol. 16 (1), pp. 8538. Date of Electronic Publication: 2025 Oct 06.
Publication Type: Journal Article
Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE
Database: MEDLINE Ultimate
Full text is not displayed to guests.
FullText Links:
  – Type: pdflink
Text:
  Availability: 1
Header DbId: mdl
DbLabel: MEDLINE Ultimate
An: 41053037
AccessLevel: 2
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
IllustrationInfo
Items – Name: Title
  Label: Title
  Group: Ti
  Data: De novo annotation reveals transcriptomic complexity across the hexaploid wheat pan-genome.
– Name: Author
  Label: Authors
  Group: Au
  Data: <searchLink fieldCode="AU" term="%22White+B%22">White B</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Lux+T%22">Lux T</searchLink>; PGSB Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany.<br /><searchLink fieldCode="AU" term="%22Rusholme-Pilcher+R%22">Rusholme-Pilcher R</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Juhász+A%22">Juhász A</searchLink>; Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, School of Science, Edith Cowan University, Joondalup, WA, Australia.<br /><searchLink fieldCode="AU" term="%22Kaithakottil+G%22">Kaithakottil G</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Duncan+S%22">Duncan S</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.; John Innes Centre, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Simmonds+J%22">Simmonds J</searchLink>; John Innes Centre, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Rees+H%22">Rees H</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Wright+J%22">Wright J</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Colmer+J%22">Colmer J</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Ward+S%22">Ward S</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Joynson+R%22">Joynson R</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.; Limagrain Europe, Clermont-Ferrand, Auvergne-Rhône-Alpes, France.<br /><searchLink fieldCode="AU" term="%22Coombes+B%22">Coombes B</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Irish+N%22">Irish N</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Henderson+S%22">Henderson S</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Barker+T%22">Barker T</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Chapman+H%22">Chapman H</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Catchpole+L%22">Catchpole L</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Gharbi+K%22">Gharbi K</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Bose+U%22">Bose U</searchLink>; Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, School of Science, Edith Cowan University, Joondalup, WA, Australia.; CSIRO Agriculture and Food, St Lucia, QLD, Australia.<br /><searchLink fieldCode="AU" term="%22Okada+M%22">Okada M</searchLink>; Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland.; Kihara Institute for Biological Research, Yokohama City University, Yokohama, Japan.; Graduate School of Science and Technology, Niigata University, Niigata, Japan.<br /><searchLink fieldCode="AU" term="%22Handa+H%22">Handa H</searchLink>; Graduate School of Life and Environmental Sciences, Kyoto Prefectural University, Kyoto, Japan.<br /><searchLink fieldCode="AU" term="%22Nasuda+S%22">Nasuda S</searchLink>; Graduate School of Agriculture, Kyoto University, Kyoto, Japan.<br /><searchLink fieldCode="AU" term="%22Shimizu+KK%22">Shimizu KK</searchLink>; Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland.; Kihara Institute for Biological Research, Yokohama City University, Yokohama, Japan.<br /><searchLink fieldCode="AU" term="%22Gundlach+H%22">Gundlach H</searchLink>; PGSB Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany.<br /><searchLink fieldCode="AU" term="%22Lang+D%22">Lang D</searchLink>; PGSB Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany.; Bundeswehr Institute of Microbiology, Munich, Germany.<br /><searchLink fieldCode="AU" term="%22Naamati+G%22">Naamati G</searchLink>; EMBL-EBI, Wellcome Genome Campus, Hinxton, Cambridgeshire, UK.<br /><searchLink fieldCode="AU" term="%22Legg+EJ%22">Legg EJ</searchLink>; Syngenta Crop Protection, Research Triangle Park, Durham, NC, USA.<br /><searchLink fieldCode="AU" term="%22Bharti+AK%22">Bharti AK</searchLink>; Syngenta Crop Protection, Research Triangle Park, Durham, NC, USA.<br /><searchLink fieldCode="AU" term="%22Colgrave+ML%22">Colgrave ML</searchLink>; Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, School of Science, Edith Cowan University, Joondalup, WA, Australia.; CSIRO Agriculture and Food, St Lucia, QLD, Australia.<br /><searchLink fieldCode="AU" term="%22Haerty+W%22">Haerty W</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Uauy+C%22">Uauy C</searchLink>; John Innes Centre, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Swarbreck+D%22">Swarbreck D</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Borrill+P%22">Borrill P</searchLink>; John Innes Centre, Norwich Research Park, Norwich, UK.<br /><searchLink fieldCode="AU" term="%22Poland+JA%22">Poland JA</searchLink>; Plant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.<br /><searchLink fieldCode="AU" term="%22Krattinger+SG%22">Krattinger SG</searchLink>; Plant Science Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.<br /><searchLink fieldCode="AU" term="%22Stein+N%22">Stein N</searchLink>; Crop Plant Genetics, Institute of Agricultural and Nutritional Sciences, Martin Luther University of Halle-Wittenberg, Halle (Saale), Germany.; Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.<br /><searchLink fieldCode="AU" term="%22Mayer+KFX%22">Mayer KFX</searchLink>; PGSB Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany.; School of Life Sciences, Technical University Munich, Freising, Germany.<br /><searchLink fieldCode="AU" term="%22Pozniak+C%22">Pozniak C</searchLink>; Crop Development Centre, The University of Saskatchewan, Saskatoon, SK, Canada.<br /><searchLink fieldCode="AU" term="%22Spannagl+M%22">Spannagl M</searchLink>; PGSB Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health, Neuherberg, Germany. manuel.spannagl@helmholtz-muenchen.de.; Centre for Crop & Food Innovation, Food Futures Institute, Murdoch University, Murdoch, WA, Australia. manuel.spannagl@helmholtz-muenchen.de.<br /><searchLink fieldCode="AU" term="%22Hall+A%22">Hall A</searchLink>; Earlham Institute, Norwich Research Park, Norwich, UK. anthony.hall@earlham.ac.uk.; School of Biological Sciences, University of East Anglia, Norwich, UK. anthony.hall@earlham.ac.uk.
– Name: AuthorCorporate
  Label: Corporate Authors
  Group: Au
  Data: <searchLink fieldCode="CA" term="%2210%2B+Wheat+Genome+Project%22">10+ Wheat Genome Project</searchLink>
– Name: TitleSource
  Label: Source
  Group: Src
  Data: <searchLink fieldCode="JN" term="%22101528555%22">Nature communications</searchLink> [Nat Commun] 2025 Oct 06; Vol. 16 (1), pp. 8538. <i>Date of Electronic Publication: </i>2025 Oct 06.
– Name: TypePub
  Label: Publication Type
  Group: TypPub
  Data: Journal Article
– Name: TitleSource
  Label: Journal Info
  Group: Src
  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Nature+Pub%2E+Group%22">Nature Pub. Group </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101528555 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>2041-1723 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2220411723%22">20411723 </searchLink><i>NLM ISO Abbreviation: </i>Nat Commun <i>Subsets: </i>MEDLINE
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=41053037
RecordInfo BibRecord:
  BibEntity:
    Identifiers:
      – Type: doi
        Value: 10.1038/s41467-025-64046-1
    Languages:
      – Code: eng
        Text: English
    PhysicalDescription:
      Pagination:
        StartPage: 8538
    Titles:
      – TitleFull: De novo annotation reveals transcriptomic complexity across the hexaploid wheat pan-genome.
        Type: main
  BibRelationships:
    HasContributorRelationships:
      – PersonEntity:
          Name:
            NameFull: White B
      – PersonEntity:
          Name:
            NameFull: Lux T
      – PersonEntity:
          Name:
            NameFull: Rusholme-Pilcher R
      – PersonEntity:
          Name:
            NameFull: Juhász A
      – PersonEntity:
          Name:
            NameFull: Kaithakottil G
      – PersonEntity:
          Name:
            NameFull: Duncan S
      – PersonEntity:
          Name:
            NameFull: Simmonds J
      – PersonEntity:
          Name:
            NameFull: Rees H
      – PersonEntity:
          Name:
            NameFull: Wright J
      – PersonEntity:
          Name:
            NameFull: Colmer J
      – PersonEntity:
          Name:
            NameFull: Ward S
      – PersonEntity:
          Name:
            NameFull: Joynson R
      – PersonEntity:
          Name:
            NameFull: Coombes B
      – PersonEntity:
          Name:
            NameFull: Irish N
      – PersonEntity:
          Name:
            NameFull: Henderson S
      – PersonEntity:
          Name:
            NameFull: Barker T
      – PersonEntity:
          Name:
            NameFull: Chapman H
      – PersonEntity:
          Name:
            NameFull: Catchpole L
      – PersonEntity:
          Name:
            NameFull: Gharbi K
      – PersonEntity:
          Name:
            NameFull: Bose U
      – PersonEntity:
          Name:
            NameFull: Okada M
      – PersonEntity:
          Name:
            NameFull: Handa H
      – PersonEntity:
          Name:
            NameFull: Nasuda S
      – PersonEntity:
          Name:
            NameFull: Shimizu KK
      – PersonEntity:
          Name:
            NameFull: Gundlach H
      – PersonEntity:
          Name:
            NameFull: Lang D
      – PersonEntity:
          Name:
            NameFull: Naamati G
      – PersonEntity:
          Name:
            NameFull: Legg EJ
      – PersonEntity:
          Name:
            NameFull: Bharti AK
      – PersonEntity:
          Name:
            NameFull: Colgrave ML
      – PersonEntity:
          Name:
            NameFull: Haerty W
      – PersonEntity:
          Name:
            NameFull: Uauy C
      – PersonEntity:
          Name:
            NameFull: Swarbreck D
      – PersonEntity:
          Name:
            NameFull: Borrill P
      – PersonEntity:
          Name:
            NameFull: Poland JA
      – PersonEntity:
          Name:
            NameFull: Krattinger SG
      – PersonEntity:
          Name:
            NameFull: Stein N
      – PersonEntity:
          Name:
            NameFull: Mayer KFX
      – PersonEntity:
          Name:
            NameFull: Pozniak C
      – PersonEntity:
          Name:
            NameFull: Spannagl M
      – PersonEntity:
          Name:
            NameFull: Hall A
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 06
              M: 10
              Text: 2025 Oct 06
              Type: published
              Y: 2025
          Identifiers:
            – Type: issn-electronic
              Value: 2041-1723
          Numbering:
            – Type: volume
              Value: 16
            – Type: issue
              Value: 1
          Titles:
            – TitleFull: Nature communications
              Type: main
ResultId 1