Standardizing RNA-seq Analysis of Fungal Pathogens Using BRC-Analytics and Agentic AI: A Candidozyma auris Case Study.
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| Title: | Standardizing RNA-seq Analysis of Fungal Pathogens Using BRC-Analytics and Agentic AI: A Candidozyma auris Case Study. |
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| Authors: | Nekrutenko A; Dept. of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, USA., Callan D; Dept. of Biology, Temple University, Philadelphia, PA, USA., Van Den Beek M; Dept. of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, USA., Baker D; Dept. of Biology, Johns Hopkins University, Baltimore, MD, USA., Rogers D; Clever Canary, LLC, Santa Cruz, CA, USA., Guerler A; Dept. of Biology, Johns Hopkins University, Baltimore, MD, USA., Chilton J; Dept. of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, USA., Clawson H; Baskin School of Engineering, University of California, Santa Cruz, USA., Cain S; Dept. of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, USA., O'Meara T; Dept. of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, USA., Beavers K; Texas Advanced Computing Center, The University of Texas, Austin, TX, USA., Schatz M; Dept. of Biology, Johns Hopkins University, Baltimore, MD, USA., Haeussler M; Baskin School of Engineering, University of California, Santa Cruz, USA., Gruning B; Dept. of Bioinformatics, Albert-Ludwigs-University Freiburg, Freiburg, Baden-Württemberg, Germany., Goecks J; Moffitt Cancer Center, Tampa, FL, USA., Pond SK; Dept. of Biology, Temple University, Philadelphia, PA, USA. |
| Source: | BioRxiv : the preprint server for biology [bioRxiv] 2025 Dec 30. Date of Electronic Publication: 2025 Dec 30. |
| Publication Type: | Journal Article; Preprint |
| Journal Info: | Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE |
| Database: | MEDLINE Ultimate |
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