Inferring context-specific site variation with evotuned protein language models.
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| Title: | Inferring context-specific site variation with evotuned protein language models. |
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| Authors: | Lytras S; Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan., Strange A; Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan., Ito J; Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan.; International Research Center for Infectious Diseases, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan., Sato K; Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan.; International Research Center for Infectious Diseases, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan.; MRC-University of Glasgow Centre for Virus Research, Glasgow G61 1QH, UK.; Graduate School of Medicine, The University of Tokyo, Tokyo 113-8654, Japan.; Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa 277-0882, Japan.; International Vaccine Design Center, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan.; Collaboration Unit for Infection, Joint Research Center for Human Retrovirus infection, Kumamoto University, Kumamoto 860-0811, Japan. |
| Source: | NAR genomics and bioinformatics [NAR Genom Bioinform] 2026 Feb 09; Vol. 8 (1), pp. lqag018. Date of Electronic Publication: 2026 Feb 09 (Print Publication: 2026). |
| Publication Type: | Journal Article |
| Journal Info: | Publisher: Oxford University Press Country of Publication: England NLM ID: 101756213 Publication Model: eCollection Cited Medium: Internet ISSN: 2631-9268 (Electronic) Linking ISSN: 26319268 NLM ISO Abbreviation: NAR Genom Bioinform Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
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| Header | DbId: mdl DbLabel: MEDLINE Ultimate An: 41669667 AccessLevel: 2 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: Inferring context-specific site variation with evotuned protein language models. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AU" term="%22Lytras+S%22">Lytras S</searchLink>; Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan.<br /><searchLink fieldCode="AU" term="%22Strange+A%22">Strange A</searchLink>; Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan.<br /><searchLink fieldCode="AU" term="%22Ito+J%22">Ito J</searchLink>; Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan.; International Research Center for Infectious Diseases, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan.<br /><searchLink fieldCode="AU" term="%22Sato+K%22">Sato K</searchLink>; Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan.; International Research Center for Infectious Diseases, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan.; MRC-University of Glasgow Centre for Virus Research, Glasgow G61 1QH, UK.; Graduate School of Medicine, The University of Tokyo, Tokyo 113-8654, Japan.; Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa 277-0882, Japan.; International Vaccine Design Center, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan.; Collaboration Unit for Infection, Joint Research Center for Human Retrovirus infection, Kumamoto University, Kumamoto 860-0811, Japan. – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%22101756213%22">NAR genomics and bioinformatics</searchLink> [NAR Genom Bioinform] 2026 Feb 09; Vol. 8 (1), pp. lqag018. <i>Date of Electronic Publication: </i>2026 Feb 09 (<i>Print Publication: </i>2026). – Name: TypePub Label: Publication Type Group: TypPub Data: Journal Article – Name: TitleSource Label: Journal Info Group: Src Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Oxford+University+Press%22">Oxford University Press </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101756213 <i>Publication Model: </i>eCollection <i>Cited Medium: </i>Internet <i>ISSN: </i>2631-9268 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2226319268%22">26319268 </searchLink><i>NLM ISO Abbreviation: </i>NAR Genom Bioinform <i>Subsets: </i>MEDLINE |
| PLink | https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=41669667 |
| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1093/nargab/lqag018 Languages: – Code: eng Text: English PhysicalDescription: Pagination: StartPage: lqag018 Titles: – TitleFull: Inferring context-specific site variation with evotuned protein language models. Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Lytras S – PersonEntity: Name: NameFull: Strange A – PersonEntity: Name: NameFull: Ito J – PersonEntity: Name: NameFull: Sato K IsPartOfRelationships: – BibEntity: Dates: – D: 09 M: 02 Text: 2026 Feb 09 Type: published Y: 2026 Identifiers: – Type: issn-electronic Value: 2631-9268 Numbering: – Type: volume Value: 8 – Type: issue Value: 1 Titles: – TitleFull: NAR genomics and bioinformatics Type: main |
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