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Prediction of Mutations and Outcome in Gastrointestinal Stromal Tumors with Deep Learning: A Multicenter, Multinational Study.

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Title: Prediction of Mutations and Outcome in Gastrointestinal Stromal Tumors with Deep Learning: A Multicenter, Multinational Study.
Authors: Bonetti A; Else Kroener Fresenius Center for Digital Health, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology, 01307 Dresden, Germany., Le VL; Department of Data and Digital Health Institut Bergonié, Bordeaux, France.; INRIA center at University of Bordeaux, Talence, France.; Bordeaux Mathematics Institute (IMB), CNRS UMR 5251, University of Bordeaux, Talence, France., Carrero ZI; Else Kroener Fresenius Center for Digital Health, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology, 01307 Dresden, Germany., Wolf F; Else Kroener Fresenius Center for Digital Health, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology, 01307 Dresden, Germany., Gustav M; Else Kroener Fresenius Center for Digital Health, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology, 01307 Dresden, Germany., Lam SW; Department of Pathology, Leiden University Medical Center, Leiden, The Netherlands., Vanhersecke L; Department of Biopathology Institut Bergonié, Bordeaux, France., Sobczuk P; Department of Soft Tissue/Bone Sarcoma and Melanoma, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland., Le Loarer F; Institute of Oncology, BRIC U1312, INSERM, Université de Bordeaux, Institut Bergonié, 33000 Bordeaux, France.; Department of Biopathology Institut Bergonié, Bordeaux, France., Lenarcik M; Department of Gastroenterology, Hepatology and Clinical Oncology, Centre of Postgraduate Medical Education, Warsaw, Poland.; Department of Cancer Pathology, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland., Rutkowski P; Department of Soft Tissue/Bone Sarcoma and Melanoma, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland., van Sabben JM; Department of Medical Oncology, The Netherlands Cancer Institute, Amsterdam, The Netherlands., Steeghs N; Department of Medical Oncology, The Netherlands Cancer Institute, Amsterdam, The Netherlands.; Department of Medical Oncology, University Medical Centre Utrecht, Utrecht University, Utrecht, The Netherlands., van Boven H; Department of Pathology, The Netherlands Cancer Institute, Amsterdam, The Netherlands., Machado I; Department of Pathology, Instituto Valenciano de Oncología, Valencia. Spain.; Patologika Laboratory Hospital Quirón-Salud, Valencia. Spain.; Department of Pathology, University of Valencia. Spain.; CIBERONC(ISCIII), Madrid. Spain., Bagué S; Department of Pathology, Hospital de la Santa Creu i Sant Pau. Barcelona. Spain., Navarro S; Department of Pathology, University of Valencia. Spain.; INCLIVA,Valencia.; CIBERONC(ISCIII), Madrid. Spain., Medina-Ceballos E; Department of Pathology, University of Valencia. Spain., Agra C; Pathology Department HGU Gregorio Marañon (Madrid). Spain., Giner F; Department of Pathology, University of Valencia. Spain.; Department of Pathology, Hospital Universitari i Politècnic La Fe, Valencia. Spain., Tapia G; Department of Pathology. Hospital Universitari Germans Trias i Pujol. IGTP. Universitat Autònoma de Barcelona. Spain., Hernández-Gallego A; Department of Pathology. Hospital Universitari Germans Trias i Pujol. IGTP. Universitat Autònoma de Barcelona. Spain., Civantos Jubera G; Department of Pathology, Hospital Universitario Virgen del Rocío, Sevilla. Spain., Cuatrecasas M; Pathology Department. Hospital Clinic, Barcelona. University of Barcelona. Barcelona. Spain.; Liver and Digestive Diseases Biomedical Research Center Network (CIBERehd).; Carlosiii Health Institute. Madrid. Spain.; Institut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS). Barcelona, Spain., Lopez-Prades S; University of Barcelona, Faculty of Medicine. Spain.; Pathology Department, Hospital Clinic Barcelona. Barcelona, Spain.; Institut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS). Barcelona, Spain., Perret RE; Department of Biopathology Institut Bergonié, Bordeaux, France.; Institute of Oncology, BRIC U1312, INSERM, Université de Bordeaux, Institut Bergonié, 33000 Bordeaux, France., Soubeyran I; Department of Biopathology Institut Bergonié, Bordeaux, France., Khalifa E; Department of Biopathology Institut Bergonié, Bordeaux, France., Blouin L; Department of Biopathology Institut Bergonié, Bordeaux, France., Wardelmann E; Gerhard-Domagk-Institute of Pathology, University Hospital Münster, Münster, Germany., Meurgey A; Biopathology Department, Centre Léon Bérard, Unicancer, Lyon, France., Collini P; Department of Advanced Diagnostics - Soft Tissue Tumor Pathology Unit - Fondazione IRCCS Istituto Nazionale dei Tumori di Milano - Milan - Italy., Voloshin A; Gerhard-Domagk-Institute of Pathology, University Hospital Münster, Münster, Germany., Yatabe Y; Department of Diagnostic Pathology, National Cancer Center Hospital, Tokyo, Japan., Hirano H; Department of Gastrointestinal Medical Oncology, National Cancer Center Hospital, Tokyo, Japan., Gronchi A; Department of Surgery, Fondazione IRCCS Istituto Nazionale dei Tumori and University of Milan, Milan, Italy., Nishida T; Department of Surgery, Japan Community Healthcare Organization Osaka Hospital, Osaka, Japan; Department of Surgery, National Cancer Center Hospital, Tokyo, Japan., Bouché O; Gastrointestinal Oncology Department. CHU Reims, Reims, France., Emile JF; Paris-Saclay University, Versailles SQY University, EA4340-BECCOH, Assistance Publique-Hôpitaux de Paris (AP-HP), Ambroise-Paré Hospital, Smart Imaging, Service de Pathologie, Boulogne, France., Ngo C; Department of Pathology, Gustave Roussy, 94800 Villejuif, France., Hohenberger P; Div. of Surgical Oncology, Mannheim University Medical Center, Medical Faculty Mannheim, University of Heidelberg, Germany., Cotarelo C; Institute of Pathology, Medical Faculty Mannheim, Heidelberg University, 68167 Mannheim, Germany., Jakob J; Department of Surgery, Sarcoma Unit, University Medical Center and Medical Faculty Mannheim, Heidelberg University, Germany., Bovee JVMG; Department of Pathology, Leiden University Medical Center, Leiden, The Netherlands., Gelderblom H; Department of Medical Oncology, Leiden University Medical Center, Leiden, The Netherlands., Szumera-Cieckiewicz A; Biobank, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland., Jean-Denis M; Research and Innovation Department, Centre Léon Bérard, Unicancer, Lyon, France., Bollard J; Research and Innovation Department, Centre Léon Bérard, Unicancer, Lyon, France., Lassau N; Imaging Department. Gustave Roussy, 94800 Villejuif, France., Lecesne A; Department of Medical Oncology Gustave Roussy, 94800 Villejuif, France., Blay JY; Department of Medicine, Centre Leon Berard, & University Claude Bernard Lyon., Italiano A; Department of Medicine Institut Bergonié, Bordeaux, France.; Institute of Oncology, BRIC U1312, INSERM, Université de Bordeaux, Institut Bergonié, 33000 Bordeaux, France., Crombé A; Department of Oncologic Imaging, Gustave Roussy, 94800, Villejuif, France., Coindre JM; Institute of Oncology, BRIC U1312, INSERM, Université de Bordeaux, Institut Bergonié, 33000 Bordeaux, France.; Department of Biopathology Institut Bergonié, Bordeaux, France., Kather JN; Else Kroener Fresenius Center for Digital Health, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology, 01307 Dresden, Germany.; Department of Medicine I, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology, 01307 Dresden, Germany.; Medical Oncology, National Center for Tumor Diseases (NCT), University Hospital Heidelberg, Heidelberg, Germany.; Pathology & Data Analytics, Leeds Institute of Medical Research at St James's, University of Leeds, Leeds, United Kingdom.
Source: MedRxiv : the preprint server for health sciences [medRxiv] 2026 Feb 03. Date of Electronic Publication: 2026 Feb 03.
Publication Type: Journal Article; Preprint
Journal Info: Country of Publication: United States NLM ID: 101767986 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: medRxiv Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
FullText Text:
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Header DbId: mdl
DbLabel: MEDLINE Ultimate
An: 41674582
AccessLevel: 2
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
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  Data: Prediction of Mutations and Outcome in Gastrointestinal Stromal Tumors with Deep Learning: A Multicenter, Multinational Study.
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  Data: <searchLink fieldCode="AU" term="%22Bonetti+A%22">Bonetti A</searchLink>; Else Kroener Fresenius Center for Digital Health, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology, 01307 Dresden, Germany.<br /><searchLink fieldCode="AU" term="%22Le+VL%22">Le VL</searchLink>; Department of Data and Digital Health Institut Bergonié, Bordeaux, France.; INRIA center at University of Bordeaux, Talence, France.; Bordeaux Mathematics Institute (IMB), CNRS UMR 5251, University of Bordeaux, Talence, France.<br /><searchLink fieldCode="AU" term="%22Carrero+ZI%22">Carrero ZI</searchLink>; Else Kroener Fresenius Center for Digital Health, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology, 01307 Dresden, Germany.<br /><searchLink fieldCode="AU" term="%22Wolf+F%22">Wolf F</searchLink>; Else Kroener Fresenius Center for Digital Health, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology, 01307 Dresden, Germany.<br /><searchLink fieldCode="AU" term="%22Gustav+M%22">Gustav M</searchLink>; Else Kroener Fresenius Center for Digital Health, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology, 01307 Dresden, Germany.<br /><searchLink fieldCode="AU" term="%22Lam+SW%22">Lam SW</searchLink>; Department of Pathology, Leiden University Medical Center, Leiden, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Vanhersecke+L%22">Vanhersecke L</searchLink>; Department of Biopathology Institut Bergonié, Bordeaux, France.<br /><searchLink fieldCode="AU" term="%22Sobczuk+P%22">Sobczuk P</searchLink>; Department of Soft Tissue/Bone Sarcoma and Melanoma, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.<br /><searchLink fieldCode="AU" term="%22Le+Loarer+F%22">Le Loarer F</searchLink>; Institute of Oncology, BRIC U1312, INSERM, Université de Bordeaux, Institut Bergonié, 33000 Bordeaux, France.; Department of Biopathology Institut Bergonié, Bordeaux, France.<br /><searchLink fieldCode="AU" term="%22Lenarcik+M%22">Lenarcik M</searchLink>; Department of Gastroenterology, Hepatology and Clinical Oncology, Centre of Postgraduate Medical Education, Warsaw, Poland.; Department of Cancer Pathology, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.<br /><searchLink fieldCode="AU" term="%22Rutkowski+P%22">Rutkowski P</searchLink>; Department of Soft Tissue/Bone Sarcoma and Melanoma, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.<br /><searchLink fieldCode="AU" term="%22van+Sabben+JM%22">van Sabben JM</searchLink>; Department of Medical Oncology, The Netherlands Cancer Institute, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Steeghs+N%22">Steeghs N</searchLink>; Department of Medical Oncology, The Netherlands Cancer Institute, Amsterdam, The Netherlands.; Department of Medical Oncology, University Medical Centre Utrecht, Utrecht University, Utrecht, The Netherlands.<br /><searchLink fieldCode="AU" term="%22van+Boven+H%22">van Boven H</searchLink>; Department of Pathology, The Netherlands Cancer Institute, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Machado+I%22">Machado I</searchLink>; Department of Pathology, Instituto Valenciano de Oncología, Valencia. Spain.; Patologika Laboratory Hospital Quirón-Salud, Valencia. Spain.; Department of Pathology, University of Valencia. Spain.; CIBERONC(ISCIII), Madrid. Spain.<br /><searchLink fieldCode="AU" term="%22Bagué+S%22">Bagué S</searchLink>; Department of Pathology, Hospital de la Santa Creu i Sant Pau. Barcelona. Spain.<br /><searchLink fieldCode="AU" term="%22Navarro+S%22">Navarro S</searchLink>; Department of Pathology, University of Valencia. Spain.; INCLIVA,Valencia.; CIBERONC(ISCIII), Madrid. Spain.<br /><searchLink fieldCode="AU" term="%22Medina-Ceballos+E%22">Medina-Ceballos E</searchLink>; Department of Pathology, University of Valencia. Spain.<br /><searchLink fieldCode="AU" term="%22Agra+C%22">Agra C</searchLink>; Pathology Department HGU Gregorio Marañon (Madrid). Spain.<br /><searchLink fieldCode="AU" term="%22Giner+F%22">Giner F</searchLink>; Department of Pathology, University of Valencia. Spain.; Department of Pathology, Hospital Universitari i Politècnic La Fe, Valencia. 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Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Lopez-Prades+S%22">Lopez-Prades S</searchLink>; University of Barcelona, Faculty of Medicine. Spain.; Pathology Department, Hospital Clinic Barcelona. Barcelona, Spain.; Institut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS). 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CHU Reims, Reims, France.<br /><searchLink fieldCode="AU" term="%22Emile+JF%22">Emile JF</searchLink>; Paris-Saclay University, Versailles SQY University, EA4340-BECCOH, Assistance Publique-Hôpitaux de Paris (AP-HP), Ambroise-Paré Hospital, Smart Imaging, Service de Pathologie, Boulogne, France.<br /><searchLink fieldCode="AU" term="%22Ngo+C%22">Ngo C</searchLink>; Department of Pathology, Gustave Roussy, 94800 Villejuif, France.<br /><searchLink fieldCode="AU" term="%22Hohenberger+P%22">Hohenberger P</searchLink>; Div. of Surgical Oncology, Mannheim University Medical Center, Medical Faculty Mannheim, University of Heidelberg, Germany.<br /><searchLink fieldCode="AU" term="%22Cotarelo+C%22">Cotarelo C</searchLink>; Institute of Pathology, Medical Faculty Mannheim, Heidelberg University, 68167 Mannheim, Germany.<br /><searchLink fieldCode="AU" term="%22Jakob+J%22">Jakob J</searchLink>; Department of Surgery, Sarcoma Unit, University Medical Center and Medical Faculty Mannheim, Heidelberg University, Germany.<br /><searchLink fieldCode="AU" term="%22Bovee+JVMG%22">Bovee JVMG</searchLink>; Department of Pathology, Leiden University Medical Center, Leiden, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Gelderblom+H%22">Gelderblom H</searchLink>; Department of Medical Oncology, Leiden University Medical Center, Leiden, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Szumera-Cieckiewicz+A%22">Szumera-Cieckiewicz A</searchLink>; Biobank, Maria Sklodowska-Curie National Research Institute of Oncology, Warsaw, Poland.<br /><searchLink fieldCode="AU" term="%22Jean-Denis+M%22">Jean-Denis M</searchLink>; Research and Innovation Department, Centre Léon Bérard, Unicancer, Lyon, France.<br /><searchLink fieldCode="AU" term="%22Bollard+J%22">Bollard J</searchLink>; Research and Innovation Department, Centre Léon Bérard, Unicancer, Lyon, France.<br /><searchLink fieldCode="AU" term="%22Lassau+N%22">Lassau N</searchLink>; Imaging Department. Gustave Roussy, 94800 Villejuif, France.<br /><searchLink fieldCode="AU" term="%22Lecesne+A%22">Lecesne A</searchLink>; Department of Medical Oncology Gustave Roussy, 94800 Villejuif, France.<br /><searchLink fieldCode="AU" term="%22Blay+JY%22">Blay JY</searchLink>; Department of Medicine, Centre Leon Berard, & University Claude Bernard Lyon.<br /><searchLink fieldCode="AU" term="%22Italiano+A%22">Italiano A</searchLink>; Department of Medicine Institut Bergonié, Bordeaux, France.; Institute of Oncology, BRIC U1312, INSERM, Université de Bordeaux, Institut Bergonié, 33000 Bordeaux, France.<br /><searchLink fieldCode="AU" term="%22Crombé+A%22">Crombé A</searchLink>; Department of Oncologic Imaging, Gustave Roussy, 94800, Villejuif, France.<br /><searchLink fieldCode="AU" term="%22Coindre+JM%22">Coindre JM</searchLink>; Institute of Oncology, BRIC U1312, INSERM, Université de Bordeaux, Institut Bergonié, 33000 Bordeaux, France.; Department of Biopathology Institut Bergonié, Bordeaux, France.<br /><searchLink fieldCode="AU" term="%22Kather+JN%22">Kather JN</searchLink>; Else Kroener Fresenius Center for Digital Health, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology, 01307 Dresden, Germany.; Department of Medicine I, Faculty of Medicine and University Hospital Carl Gustav Carus, TUD Dresden University of Technology, 01307 Dresden, Germany.; Medical Oncology, National Center for Tumor Diseases (NCT), University Hospital Heidelberg, Heidelberg, Germany.; Pathology & Data Analytics, Leeds Institute of Medical Research at St James's, University of Leeds, Leeds, United Kingdom.
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            NameFull: Hohenberger P
      – PersonEntity:
          Name:
            NameFull: Cotarelo C
      – PersonEntity:
          Name:
            NameFull: Jakob J
      – PersonEntity:
          Name:
            NameFull: Bovee JVMG
      – PersonEntity:
          Name:
            NameFull: Gelderblom H
      – PersonEntity:
          Name:
            NameFull: Szumera-Cieckiewicz A
      – PersonEntity:
          Name:
            NameFull: Jean-Denis M
      – PersonEntity:
          Name:
            NameFull: Bollard J
      – PersonEntity:
          Name:
            NameFull: Lassau N
      – PersonEntity:
          Name:
            NameFull: Lecesne A
      – PersonEntity:
          Name:
            NameFull: Blay JY
      – PersonEntity:
          Name:
            NameFull: Italiano A
      – PersonEntity:
          Name:
            NameFull: Crombé A
      – PersonEntity:
          Name:
            NameFull: Coindre JM
      – PersonEntity:
          Name:
            NameFull: Kather JN
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 03
              M: 02
              Text: 2026 Feb 03
              Type: published
              Y: 2026
          Titles:
            – TitleFull: MedRxiv : the preprint server for health sciences
              Type: main
ResultId 1