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The genomic diversity of SARS-CoV-2 Omicron lineages collected during routine sentinel surveillance in Tanzania between November 2022 and July 2023.

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Title: The genomic diversity of SARS-CoV-2 Omicron lineages collected during routine sentinel surveillance in Tanzania between November 2022 and July 2023.
Authors: Mapunda LA; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania. amonlawrence65@gmail.com., Kelly ME; World Health Organisation, Dar es Salaam, Tanzania., Henerico S; Bugando Medical Centre, Mwanza, Tanzania., Francis M; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania., Ituka A; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania., Machange O; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania., Kisanga A; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania., Mushumbusi JP; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania., Ndunguru F; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania., Mauki II; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania., Machange OG; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania., Baluhya R; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania., Msuya J; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania., Libenanga R; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania., Mwafulango A; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania., Van Heusden P; South African National Bioinformatics Institute, University of the Western Cape, Cape Town, South Africa., Inzaule S; Amsterdam Institute of Global Health and Development, Amsterdam, The Netherlands., Misinzo G; SACIDS Foundation for One Health, Sokoine University of Agriculture, Morogoro, Tanzania., Moremi N; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania.
Source: BMC genomics [BMC Genomics] 2026 Feb 14; Vol. 27 (1). Date of Electronic Publication: 2026 Feb 14.
Publication Type: Journal Article
Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE
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  Data: The genomic diversity of SARS-CoV-2 Omicron lineages collected during routine sentinel surveillance in Tanzania between November 2022 and July 2023.
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  Data: <searchLink fieldCode="AU" term="%22Mapunda+LA%22">Mapunda LA</searchLink>; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania. amonlawrence65@gmail.com.<br /><searchLink fieldCode="AU" term="%22Kelly+ME%22">Kelly ME</searchLink>; World Health Organisation, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Henerico+S%22">Henerico S</searchLink>; Bugando Medical Centre, Mwanza, Tanzania.<br /><searchLink fieldCode="AU" term="%22Francis+M%22">Francis M</searchLink>; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Ituka+A%22">Ituka A</searchLink>; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Machange+O%22">Machange O</searchLink>; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Kisanga+A%22">Kisanga A</searchLink>; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Mushumbusi+JP%22">Mushumbusi JP</searchLink>; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Ndunguru+F%22">Ndunguru F</searchLink>; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Mauki+II%22">Mauki II</searchLink>; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Machange+OG%22">Machange OG</searchLink>; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Baluhya+R%22">Baluhya R</searchLink>; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Msuya+J%22">Msuya J</searchLink>; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Libenanga+R%22">Libenanga R</searchLink>; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Mwafulango+A%22">Mwafulango A</searchLink>; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Van+Heusden+P%22">Van Heusden P</searchLink>; South African National Bioinformatics Institute, University of the Western Cape, Cape Town, South Africa.<br /><searchLink fieldCode="AU" term="%22Inzaule+S%22">Inzaule S</searchLink>; Amsterdam Institute of Global Health and Development, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Misinzo+G%22">Misinzo G</searchLink>; SACIDS Foundation for One Health, Sokoine University of Agriculture, Morogoro, Tanzania.<br /><searchLink fieldCode="AU" term="%22Moremi+N%22">Moremi N</searchLink>; National Public Health Laboratory, Ministry of Health, Dar es Salaam, Tanzania.
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  Data: <searchLink fieldCode="JN" term="%22100965258%22">BMC genomics</searchLink> [BMC Genomics] 2026 Feb 14; Vol. 27 (1). <i>Date of Electronic Publication: </i>2026 Feb 14.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22BioMed+Central%22">BioMed Central </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>100965258 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1471-2164 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2214712164%22">14712164 </searchLink><i>NLM ISO Abbreviation: </i>BMC Genomics <i>Subsets: </i>MEDLINE
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              Text: 2026 Feb 14
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