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Comparison of whole-viral genome sequencing and PCR-based assay for anal HPV detection to inform clinical implementation.

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Title: Comparison of whole-viral genome sequencing and PCR-based assay for anal HPV detection to inform clinical implementation.
Authors: Harfouch O; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA. Electronic address: oharfouch@ihv.umaryland.edu., MacMath D; National Institute of Allergy and Infectious Diseases (NIAID), Bethesda, MD, USA., Subramanian P; Bioinformatics and Computational Biosciences Branch, Office of Cyber Infrastructure and Computational Biology, NIAID, Bethesda, MD, USA., Eyasu R; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA., Ramadhani HO; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA., Ye P; National Institute of Allergy and Infectious Diseases (NIAID), Bethesda, MD, USA., Davis A; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA., Zoltick M; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA., Ebah E; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA., Shah A; National Institute of Allergy and Infectious Diseases (NIAID), Bethesda, MD, USA., Cover A; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA., Bijole P; HIPS Clinic, Washington DC, USA., Silk R; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA., Sternberg D; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA., Liu T; National Institute of Health Clinical Center - Critical Care Medicine Department, Bethesda, MD, USA., Garrett G; National Institute of Health Clinical Center - Critical Care Medicine Department, Bethesda, MD, USA., Jones M; HIPS Clinic, Washington DC, USA., Kier R; HIPS Clinic, Washington DC, USA., Masur H; National Institute of Health Clinical Center - Critical Care Medicine Department, Bethesda, MD, USA., Kottilil S; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA., Kattakuzhy S; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA., Rosenthal ES; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA., Lisco A; National Institute of Allergy and Infectious Diseases (NIAID), Bethesda, MD, USA.
Source: Journal of virological methods [J Virol Methods] 2026 Jun; Vol. 343, pp. 115366. Date of Electronic Publication: 2026 Feb 13.
Publication Type: Journal Article; Comparative Study
Journal Info: Publisher: Elsevier/North-Holland Biomedical Press Country of Publication: Netherlands NLM ID: 8005839 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-0984 (Electronic) Linking ISSN: 01660934 NLM ISO Abbreviation: J Virol Methods Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Comparison of whole-viral genome sequencing and PCR-based assay for anal HPV detection to inform clinical implementation.
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  Data: <searchLink fieldCode="AU" term="%22Harfouch+O%22">Harfouch O</searchLink>; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA. Electronic address: oharfouch@ihv.umaryland.edu.<br /><searchLink fieldCode="AU" term="%22MacMath+D%22">MacMath D</searchLink>; National Institute of Allergy and Infectious Diseases (NIAID), Bethesda, MD, USA.<br /><searchLink fieldCode="AU" term="%22Subramanian+P%22">Subramanian P</searchLink>; Bioinformatics and Computational Biosciences Branch, Office of Cyber Infrastructure and Computational Biology, NIAID, Bethesda, MD, USA.<br /><searchLink fieldCode="AU" term="%22Eyasu+R%22">Eyasu R</searchLink>; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA.<br /><searchLink fieldCode="AU" term="%22Ramadhani+HO%22">Ramadhani HO</searchLink>; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA.<br /><searchLink fieldCode="AU" term="%22Ye+P%22">Ye P</searchLink>; National Institute of Allergy and Infectious Diseases (NIAID), Bethesda, MD, USA.<br /><searchLink fieldCode="AU" term="%22Davis+A%22">Davis A</searchLink>; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA.<br /><searchLink fieldCode="AU" term="%22Zoltick+M%22">Zoltick M</searchLink>; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA.<br /><searchLink fieldCode="AU" term="%22Ebah+E%22">Ebah E</searchLink>; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA.<br /><searchLink fieldCode="AU" term="%22Shah+A%22">Shah A</searchLink>; National Institute of Allergy and Infectious Diseases (NIAID), Bethesda, MD, USA.<br /><searchLink fieldCode="AU" term="%22Cover+A%22">Cover A</searchLink>; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA.<br /><searchLink fieldCode="AU" term="%22Bijole+P%22">Bijole P</searchLink>; HIPS Clinic, Washington DC, USA.<br /><searchLink fieldCode="AU" term="%22Silk+R%22">Silk R</searchLink>; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA.<br /><searchLink fieldCode="AU" term="%22Sternberg+D%22">Sternberg D</searchLink>; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA.<br /><searchLink fieldCode="AU" term="%22Liu+T%22">Liu T</searchLink>; National Institute of Health Clinical Center - Critical Care Medicine Department, Bethesda, MD, USA.<br /><searchLink fieldCode="AU" term="%22Garrett+G%22">Garrett G</searchLink>; National Institute of Health Clinical Center - Critical Care Medicine Department, Bethesda, MD, USA.<br /><searchLink fieldCode="AU" term="%22Jones+M%22">Jones M</searchLink>; HIPS Clinic, Washington DC, USA.<br /><searchLink fieldCode="AU" term="%22Kier+R%22">Kier R</searchLink>; HIPS Clinic, Washington DC, USA.<br /><searchLink fieldCode="AU" term="%22Masur+H%22">Masur H</searchLink>; National Institute of Health Clinical Center - Critical Care Medicine Department, Bethesda, MD, USA.<br /><searchLink fieldCode="AU" term="%22Kottilil+S%22">Kottilil S</searchLink>; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA.<br /><searchLink fieldCode="AU" term="%22Kattakuzhy+S%22">Kattakuzhy S</searchLink>; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA.<br /><searchLink fieldCode="AU" term="%22Rosenthal+ES%22">Rosenthal ES</searchLink>; University of Maryland Baltimore, School of Medicine, Institute of Human Virology, Baltimore, MD, USA.<br /><searchLink fieldCode="AU" term="%22Lisco+A%22">Lisco A</searchLink>; National Institute of Allergy and Infectious Diseases (NIAID), Bethesda, MD, USA.
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  Data: <searchLink fieldCode="JN" term="%228005839%22">Journal of virological methods</searchLink> [J Virol Methods] 2026 Jun; Vol. 343, pp. 115366. <i>Date of Electronic Publication: </i>2026 Feb 13.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Elsevier%2FNorth-Holland+Biomedical+Press%22">Elsevier/North-Holland Biomedical Press </searchLink><i>Country of Publication: </i>Netherlands <i>NLM ID: </i>8005839 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1879-0984 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2201660934%22">01660934 </searchLink><i>NLM ISO Abbreviation: </i>J Virol Methods <i>Subsets: </i>MEDLINE
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        Value: 10.1016/j.jviromet.2026.115366
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        Text: English
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