A comprehensive assessment of tandem repeat genotyping methods for Nanopore long-read genomes.
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| Title: | A comprehensive assessment of tandem repeat genotyping methods for Nanopore long-read genomes. |
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| Authors: | Aliyev E; Department of Biomedical Informatics, University of Colorado Anschutz, Aurora, CO, USA., Avvaru A; Department of Biomedical Informatics, University of Colorado Anschutz, Aurora, CO, USA., De Coster W; Department of Biomedical Sciences, University of Antwerp, Antwerp, Belgium.; VIB Center for Molecular Neurology, VIB, Antwerp, Belgium., Arner GM; Department of Biomedical Informatics, University of Colorado Anschutz, Aurora, CO, USA.; Department of Computer Sciences, Metropolitan State University of Denver, CO, USA., Nyaga DM; Liggins Institute, University of Auckland, New Zealand., Gibson SB; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Weisburd B; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA., Gu B; Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, CA, USA., Gonzaga-Jauregui C; International Laboratory for Human Genome Research, Laboratorio Internacional de Investigación sobre el Genoma Humano, Universidad Nacional Autónoma de México, Querétaro, Mexico., Chaisson MJP; Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, CA, USA.; Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, CA, USA., Miller DE; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Division of Medical Genetics, Department of Pediatrics, University of Washington, Seattle, WA.; Department of Laboratory Medicine and Pathology, University of Washington, Seattle, WA.; Brotman Baty Institute for Precision Medicine, University of Washington, Seattle, WA., Ostrowski E; Liggins Institute, University of Auckland, New Zealand.; Department of Biological Sciences, University of Washington Bothell, WA, USA., Dashnow H; Department of Biomedical Informatics, University of Colorado Anschutz, Aurora, CO, USA. |
| Corporate Authors: | 1000 Genomes Long-Read Sequencing Consortium |
| Source: | BioRxiv : the preprint server for biology [bioRxiv] 2026 Mar 03. Date of Electronic Publication: 2026 Mar 03. |
| Publication Type: | Journal Article; Preprint |
| Journal Info: | Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE |
| Database: | MEDLINE Ultimate |
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