View in EDS HTML Full Text PDF Full Text

FAVABEAN and FALAPhyl: Open-source pipelines for scalable 16s rRNA microbiome data processing and visualization.

Saved in:
Bibliographic Details
Title: FAVABEAN and FALAPhyl: Open-source pipelines for scalable 16s rRNA microbiome data processing and visualization.
Authors: Faridoun A; Department of General Dental Practice, College of Dentistry, Kuwait University, Kuwait., Carvalho R; School of dentistry, Faculty of Medicine and Dentistry, University of Alberta, Alberta., Smith J; Faculty of Dentistry, Dalhousie University, Halifax, Canada., Gibb A; School of dentistry, Faculty of Medicine and Dentistry, University of Alberta, Alberta., Jain L; School of dentistry, Faculty of Medicine and Dentistry, University of Alberta, Alberta., Zhang A; Department of Translational Research, Dasman Diabetes Institute, Dasman, Kuwait city, Kuwait., Sran A; Department of Translational Research, Dasman Diabetes Institute, Dasman, Kuwait city, Kuwait., Redmond J; Department of Translational Research, Dasman Diabetes Institute, Dasman, Kuwait city, Kuwait., Malik MZ; High School Youth Researcher Summer (HYRS) Program, University of Alberta, Alberta., Gibson M; Department of Periodontology, School of Dentistry, Indianapolis, Indiana, United States of America., Haider A; School of dentistry, Faculty of Medicine and Dentistry, University of Alberta, Alberta., Rekhi U; School of dentistry, Faculty of Medicine and Dentistry, University of Alberta, Alberta., Bhagirath A; Faculty of Dentistry, Dalhousie University, Halifax, Canada., Rock LD; Faculty of Dentistry, Dalhousie University, Halifax, Canada.; Department of Pathology, Faculty of Medicine, Dalhousie University, Halifax, Canada.; Department of Anatomical Pathology, QEII Hospital, Nova Scotia Health, Halifax, Canada., Altabtbaei K; School of dentistry, Faculty of Medicine and Dentistry, University of Alberta, Alberta.; High School Youth Researcher Summer (HYRS) Program, University of Alberta, Alberta.
Source: PloS one [PLoS One] 2026 Apr 07; Vol. 21 (4), pp. e0331145. Date of Electronic Publication: 2026 Apr 07 (Print Publication: 2026).
Publication Type: Journal Article
Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE
Database: MEDLINE Ultimate
Full text is not displayed to guests.
FullText Links:
  – Type: pdflink
Text:
  Availability: 1
Header DbId: mdl
DbLabel: MEDLINE Ultimate
An: 41945577
AccessLevel: 2
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
IllustrationInfo
Items – Name: Title
  Label: Title
  Group: Ti
  Data: FAVABEAN and FALAPhyl: Open-source pipelines for scalable 16s rRNA microbiome data processing and visualization.
– Name: Author
  Label: Authors
  Group: Au
  Data: <searchLink fieldCode="AU" term="%22Faridoun+A%22">Faridoun A</searchLink>; Department of General Dental Practice, College of Dentistry, Kuwait University, Kuwait.<br /><searchLink fieldCode="AU" term="%22Carvalho+R%22">Carvalho R</searchLink>; School of dentistry, Faculty of Medicine and Dentistry, University of Alberta, Alberta.<br /><searchLink fieldCode="AU" term="%22Smith+J%22">Smith J</searchLink>; Faculty of Dentistry, Dalhousie University, Halifax, Canada.<br /><searchLink fieldCode="AU" term="%22Gibb+A%22">Gibb A</searchLink>; School of dentistry, Faculty of Medicine and Dentistry, University of Alberta, Alberta.<br /><searchLink fieldCode="AU" term="%22Jain+L%22">Jain L</searchLink>; School of dentistry, Faculty of Medicine and Dentistry, University of Alberta, Alberta.<br /><searchLink fieldCode="AU" term="%22Zhang+A%22">Zhang A</searchLink>; Department of Translational Research, Dasman Diabetes Institute, Dasman, Kuwait city, Kuwait.<br /><searchLink fieldCode="AU" term="%22Sran+A%22">Sran A</searchLink>; Department of Translational Research, Dasman Diabetes Institute, Dasman, Kuwait city, Kuwait.<br /><searchLink fieldCode="AU" term="%22Redmond+J%22">Redmond J</searchLink>; Department of Translational Research, Dasman Diabetes Institute, Dasman, Kuwait city, Kuwait.<br /><searchLink fieldCode="AU" term="%22Malik+MZ%22">Malik MZ</searchLink>; High School Youth Researcher Summer (HYRS) Program, University of Alberta, Alberta.<br /><searchLink fieldCode="AU" term="%22Gibson+M%22">Gibson M</searchLink>; Department of Periodontology, School of Dentistry, Indianapolis, Indiana, United States of America.<br /><searchLink fieldCode="AU" term="%22Haider+A%22">Haider A</searchLink>; School of dentistry, Faculty of Medicine and Dentistry, University of Alberta, Alberta.<br /><searchLink fieldCode="AU" term="%22Rekhi+U%22">Rekhi U</searchLink>; School of dentistry, Faculty of Medicine and Dentistry, University of Alberta, Alberta.<br /><searchLink fieldCode="AU" term="%22Bhagirath+A%22">Bhagirath A</searchLink>; Faculty of Dentistry, Dalhousie University, Halifax, Canada.<br /><searchLink fieldCode="AU" term="%22Rock+LD%22">Rock LD</searchLink>; Faculty of Dentistry, Dalhousie University, Halifax, Canada.; Department of Pathology, Faculty of Medicine, Dalhousie University, Halifax, Canada.; Department of Anatomical Pathology, QEII Hospital, Nova Scotia Health, Halifax, Canada.<br /><searchLink fieldCode="AU" term="%22Altabtbaei+K%22">Altabtbaei K</searchLink>; School of dentistry, Faculty of Medicine and Dentistry, University of Alberta, Alberta.; High School Youth Researcher Summer (HYRS) Program, University of Alberta, Alberta.
– Name: TitleSource
  Label: Source
  Group: Src
  Data: <searchLink fieldCode="JN" term="%22101285081%22">PloS one</searchLink> [PLoS One] 2026 Apr 07; Vol. 21 (4), pp. e0331145. <i>Date of Electronic Publication: </i>2026 Apr 07 (<i>Print Publication: </i>2026).
– Name: TypePub
  Label: Publication Type
  Group: TypPub
  Data: Journal Article
– Name: TitleSource
  Label: Journal Info
  Group: Src
  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Public+Library+of+Science%22">Public Library of Science </searchLink><i>Country of Publication: </i>United States <i>NLM ID: </i>101285081 <i>Publication Model: </i>eCollection <i>Cited Medium: </i>Internet <i>ISSN: </i>1932-6203 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2219326203%22">19326203 </searchLink><i>NLM ISO Abbreviation: </i>PLoS One <i>Subsets: </i>MEDLINE
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=41945577
RecordInfo BibRecord:
  BibEntity:
    Identifiers:
      – Type: doi
        Value: 10.1371/journal.pone.0331145
    Languages:
      – Code: eng
        Text: English
    PhysicalDescription:
      Pagination:
        StartPage: e0331145
    Titles:
      – TitleFull: FAVABEAN and FALAPhyl: Open-source pipelines for scalable 16s rRNA microbiome data processing and visualization.
        Type: main
  BibRelationships:
    HasContributorRelationships:
      – PersonEntity:
          Name:
            NameFull: Faridoun A
      – PersonEntity:
          Name:
            NameFull: Carvalho R
      – PersonEntity:
          Name:
            NameFull: Smith J
      – PersonEntity:
          Name:
            NameFull: Gibb A
      – PersonEntity:
          Name:
            NameFull: Jain L
      – PersonEntity:
          Name:
            NameFull: Zhang A
      – PersonEntity:
          Name:
            NameFull: Sran A
      – PersonEntity:
          Name:
            NameFull: Redmond J
      – PersonEntity:
          Name:
            NameFull: Malik MZ
      – PersonEntity:
          Name:
            NameFull: Gibson M
      – PersonEntity:
          Name:
            NameFull: Haider A
      – PersonEntity:
          Name:
            NameFull: Rekhi U
      – PersonEntity:
          Name:
            NameFull: Bhagirath A
      – PersonEntity:
          Name:
            NameFull: Rock LD
      – PersonEntity:
          Name:
            NameFull: Altabtbaei K
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 07
              M: 04
              Text: 2026 Apr 07
              Type: published
              Y: 2026
          Identifiers:
            – Type: issn-electronic
              Value: 1932-6203
          Numbering:
            – Type: volume
              Value: 21
            – Type: issue
              Value: 4
          Titles:
            – TitleFull: PloS one
              Type: main
ResultId 1