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Adoption of Standard Reference SNP Identifiers in Agricultural Genomics for Interoperability and Data Reuse.

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Title: Adoption of Standard Reference SNP Identifiers in Agricultural Genomics for Interoperability and Data Reuse.
Authors: Tello-Ruiz MK; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA. marcela@phxbio.org.; Phoenix Bioinformatics, 39899 Balentine Dr, Ste 200, Newark, CA, 94560, USA. marcela@phxbio.org., Cezard T; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK., Andorf C; Department of Computer Science, Iowa State University, Ames, IA, 50011, USA.; United States Department of Agriculture, Agricultural Research Service (USDA-ARS), Corn Insects and Crop Genetics Research Unit, Ames, IA, 50011, USA., Balyan S; Indian Biological Data Centre, Regional Centre for Biotechnology, Faridabad, Haryana, 121001, India., Bassil NV; USDA ARS National Clonal Germplasm Repository, Corvallis, OR, 97333, USA., Beier S; Institute of Bio- and Geosciences (IBG-4 Bioinformatics), CEPLAS, BIOSC, Forschungszentrum Jülich GmbH, Wilhelm Johnen Straße, Jülich, Germany., Bushakra JM; USDA ARS National Clonal Germplasm Repository, Corvallis, OR, 97333, USA., Chang TH; Program in Plant Health Care, Academy of Circular Economy, National Chung Hsing University, Taichung, Taiwan., Chogule K; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA., Cobo-Simón I; Institute of Forest Science, National Center National Institute for Agricultural and Food Research and Technology, Spanish National Research Council (ICIFOR-INIA-CSIC), Madrid, Spain., Dyer S; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK., Elsik CG; Division of Animal Sciences, University of Missouri, Columbia, MO, 65211, USA., Gladman N; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA.; USDA ARS NEA, Plant Soil & Nutrition Laboratory Research Unit, Ithaca, NY, 14853, USA., Harrison M; USDA ARS, Plant Genetic Resources Conservation Unit, Griffin, GA, 30223, USA., Humann J; Department of Horticulture, Washington State University, Pullman, WA, 99164, USA., Kim C; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA., Kumar V; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA., Nandety RS; USDA ARS PA, Edward T. Schafer Agricultural Research Center, Fargo, ND, 58102, USA., Nelson R; United States Department of Agriculture, Agricultural Research Service (USDA-ARS), Corn Insects and Crop Genetics Research Unit, Ames, IA, 50011, USA., Olson A; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA., Sen TZ; USDA ARS, Crop Improvement and Genetics Research, Albany, CA, 94710, USA., Sheehan MJ; Department of Plant Breeding and Genetics, Cornell University, Ithaca, NY, 14850, USA.; Breeding Insight, University of Florida - IFAS, Gainesville, FL, 32611, USA., Wei S; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA., Ware D; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA. ware@cshl.edu.; USDA ARS NEA, Plant Soil & Nutrition Laboratory Research Unit, Ithaca, NY, 14853, USA. ware@cshl.edu.
Source: Scientific data [Sci Data] 2026 Apr 16; Vol. 13 (1). Date of Electronic Publication: 2026 Apr 16.
Publication Type: Journal Article; Dataset; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101640192 Publication Model: Electronic Cited Medium: Internet ISSN: 2052-4463 (Electronic) Linking ISSN: 20524463 NLM ISO Abbreviation: Sci Data Subsets: MEDLINE
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  Data: <searchLink fieldCode="AU" term="%22Tello-Ruiz+MK%22">Tello-Ruiz MK</searchLink>; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA. marcela@phxbio.org.; Phoenix Bioinformatics, 39899 Balentine Dr, Ste 200, Newark, CA, 94560, USA. marcela@phxbio.org.<br /><searchLink fieldCode="AU" term="%22Cezard+T%22">Cezard T</searchLink>; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK.<br /><searchLink fieldCode="AU" term="%22Andorf+C%22">Andorf C</searchLink>; Department of Computer Science, Iowa State University, Ames, IA, 50011, USA.; United States Department of Agriculture, Agricultural Research Service (USDA-ARS), Corn Insects and Crop Genetics Research Unit, Ames, IA, 50011, USA.<br /><searchLink fieldCode="AU" term="%22Balyan+S%22">Balyan S</searchLink>; Indian Biological Data Centre, Regional Centre for Biotechnology, Faridabad, Haryana, 121001, India.<br /><searchLink fieldCode="AU" term="%22Bassil+NV%22">Bassil NV</searchLink>; USDA ARS National Clonal Germplasm Repository, Corvallis, OR, 97333, USA.<br /><searchLink fieldCode="AU" term="%22Beier+S%22">Beier S</searchLink>; Institute of Bio- and Geosciences (IBG-4 Bioinformatics), CEPLAS, BIOSC, Forschungszentrum Jülich GmbH, Wilhelm Johnen Straße, Jülich, Germany.<br /><searchLink fieldCode="AU" term="%22Bushakra+JM%22">Bushakra JM</searchLink>; USDA ARS National Clonal Germplasm Repository, Corvallis, OR, 97333, USA.<br /><searchLink fieldCode="AU" term="%22Chang+TH%22">Chang TH</searchLink>; Program in Plant Health Care, Academy of Circular Economy, National Chung Hsing University, Taichung, Taiwan.<br /><searchLink fieldCode="AU" term="%22Chogule+K%22">Chogule K</searchLink>; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA.<br /><searchLink fieldCode="AU" term="%22Cobo-Simón+I%22">Cobo-Simón I</searchLink>; Institute of Forest Science, National Center National Institute for Agricultural and Food Research and Technology, Spanish National Research Council (ICIFOR-INIA-CSIC), Madrid, Spain.<br /><searchLink fieldCode="AU" term="%22Dyer+S%22">Dyer S</searchLink>; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK.<br /><searchLink fieldCode="AU" term="%22Elsik+CG%22">Elsik CG</searchLink>; Division of Animal Sciences, University of Missouri, Columbia, MO, 65211, USA.<br /><searchLink fieldCode="AU" term="%22Gladman+N%22">Gladman N</searchLink>; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA.; USDA ARS NEA, Plant Soil & Nutrition Laboratory Research Unit, Ithaca, NY, 14853, USA.<br /><searchLink fieldCode="AU" term="%22Harrison+M%22">Harrison M</searchLink>; USDA ARS, Plant Genetic Resources Conservation Unit, Griffin, GA, 30223, USA.<br /><searchLink fieldCode="AU" term="%22Humann+J%22">Humann J</searchLink>; Department of Horticulture, Washington State University, Pullman, WA, 99164, USA.<br /><searchLink fieldCode="AU" term="%22Kim+C%22">Kim C</searchLink>; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA.<br /><searchLink fieldCode="AU" term="%22Kumar+V%22">Kumar V</searchLink>; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA.<br /><searchLink fieldCode="AU" term="%22Nandety+RS%22">Nandety RS</searchLink>; USDA ARS PA, Edward T. Schafer Agricultural Research Center, Fargo, ND, 58102, USA.<br /><searchLink fieldCode="AU" term="%22Nelson+R%22">Nelson R</searchLink>; United States Department of Agriculture, Agricultural Research Service (USDA-ARS), Corn Insects and Crop Genetics Research Unit, Ames, IA, 50011, USA.<br /><searchLink fieldCode="AU" term="%22Olson+A%22">Olson A</searchLink>; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA.<br /><searchLink fieldCode="AU" term="%22Sen+TZ%22">Sen TZ</searchLink>; USDA ARS, Crop Improvement and Genetics Research, Albany, CA, 94710, USA.<br /><searchLink fieldCode="AU" term="%22Sheehan+MJ%22">Sheehan MJ</searchLink>; Department of Plant Breeding and Genetics, Cornell University, Ithaca, NY, 14850, USA.; Breeding Insight, University of Florida - IFAS, Gainesville, FL, 32611, USA.<br /><searchLink fieldCode="AU" term="%22Wei+S%22">Wei S</searchLink>; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA.<br /><searchLink fieldCode="AU" term="%22Ware+D%22">Ware D</searchLink>; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA. ware@cshl.edu.; USDA ARS NEA, Plant Soil & Nutrition Laboratory Research Unit, Ithaca, NY, 14853, USA. ware@cshl.edu.
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