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Project ODIN: advancing environmental genomic surveillance for public health across sub-Saharan Africa.

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Title: Project ODIN: advancing environmental genomic surveillance for public health across sub-Saharan Africa.
Authors: Baker B; Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK., Baz Lomba JA; Department of Infection Control and Preparedness, Norwegian Institute of Public Health, Oslo, Norway., Bitilinyu-Bangoh J; Ministry of Health, Public Health Institute of Malawi, Lilongwe, Malawi., Berglöf A; WaterAid, Stockholm, Sweden., Bombaywala S; Department of Biomedical Sciences, Faculty of Medicine and Health Sciences, Ghent University, Ghent, Belgium; VIB-UGent Center for Medical Biotechnology, VIB, Ghent, Belgium., Calvert-Joshua T; Public Health Alliance for Genomic Epidemiology, University of the Western Cape, Bellville, South Africa., Kaboré B; Unité de Recherche Clinique de Nanoro, Institut de Recherche en Sciences de la Santé, Nanoro, Burkina Faso., Kingpriest P; Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK., Lang T; Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK., Levy JI; Public Health Alliance for Genomic Epidemiology, University of the Western Cape, Bellville, South Africa; Department of Translational Medicine, The Scripps Research Institute, La Jolla, CA, USA., Lompo P; Unité de Recherche Clinique de Nanoro, Institut de Recherche en Sciences de la Santé, Nanoro, Burkina Faso., Lyimo E; Tanga Centre, National Institute for Medical Research, Tanga, Tanzania., Martens L; Department of Biomedical Sciences, Faculty of Medicine and Health Sciences, Ghent University, Ghent, Belgium; VIB-UGent Center for Medical Biotechnology, VIB, Ghent, Belgium., Mavoko HM; Tropical Medicine Department, University of Kinshasa, Kinshasa, Democratic Republic of the Congo., Mesuere B; Department of Applied Mathematics, Computer Science and Statistics, Ghent University, Ghent, Belgium., Moremi N; National Public Health Laboratory, Dar es Salaam, Tanzania., Mulder N; Computational Biology Division, Department of Integrative Biomedical Sciences, IDM, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa., Ndure SL; Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK., Rameto MA; Ethiopian Public Health Institute, Addis Ababa, Ethiopia., Rinke de Wit TF; Amsterdam Institute for Global Health and Development, Department of Global Health, Amsterdam University Medical Center, Amsterdam, Netherlands., Sebukoto H; Tanga Centre, National Institute for Medical Research, Tanga, Tanzania., Smith E; Public Health Alliance for Genomic Epidemiology, University of the Western Cape, Bellville, South Africa; Center for Infectious Disease Research and Policy, University of Minnesota, Minneapolis, MN, USA., Tahita MC; Unité de Recherche Clinique de Nanoro, Institut de Recherche en Sciences de la Santé, Nanoro, Burkina Faso., Tevuzula VM; Tropical Medicine Department, University of Kinshasa, Kinshasa, Democratic Republic of the Congo., Tippett Barr BA; Nyanja Health Research Institute, Salima, Malawi., Tiwari A; Microbiology Unit, Department of Public Health, Finnish Institute for Health and Welfare, Kuopio, Finland; Department of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinki, Helsinki, Finland., Tran T; Norwegian Research Centre, Bergen, Norway., Ubomba-Jaswa E; Water Research Commission, Pretoria, South Africa., Van Den Bossche T; Department of Biomedical Sciences, Faculty of Medicine and Health Sciences, Ghent University, Ghent, Belgium; VIB-UGent Center for Medical Biotechnology, VIB, Ghent, Belgium., Wolday D; Ethiopian Public Health Institute, Addis Ababa, Ethiopia; Michael G DeGroote Institute for Infectious Diseases Research, Department of Biochemistry and Biomedical Sciences, Faculty of Health Sciences, McMaster University, Hamilton, ON, Canada., Krolicka A; Norwegian Research Centre, Bergen, Norway., Baraka V; Tanga Centre, National Institute for Medical Research, Tanga, Tanzania., Pitkänen T; Microbiology Unit, Department of Public Health, Finnish Institute for Health and Welfare, Kuopio, Finland; Department of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinki, Helsinki, Finland., Lood R; Division of Infection Medicine, Department of Clinical Sciences Lund, Faculty of Medicine, Lund University, Lund, Sweden. Electronic address: rolf.lood@med.lu.se.
Source: The Lancet. Microbe [Lancet Microbe] 2026 May 28, pp. 101426. Date of Electronic Publication: 2026 May 28.
Publication Type: Journal Article; Review
Journal Info: Publisher: Elsevier Ltd Country of Publication: England NLM ID: 101769019 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2666-5247 (Electronic) Linking ISSN: 26665247 NLM ISO Abbreviation: Lancet Microbe Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Project ODIN: advancing environmental genomic surveillance for public health across sub-Saharan Africa.
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  Data: <searchLink fieldCode="AU" term="%22Baker+B%22">Baker B</searchLink>; Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK.<br /><searchLink fieldCode="AU" term="%22Baz+Lomba+JA%22">Baz Lomba JA</searchLink>; Department of Infection Control and Preparedness, Norwegian Institute of Public Health, Oslo, Norway.<br /><searchLink fieldCode="AU" term="%22Bitilinyu-Bangoh+J%22">Bitilinyu-Bangoh J</searchLink>; Ministry of Health, Public Health Institute of Malawi, Lilongwe, Malawi.<br /><searchLink fieldCode="AU" term="%22Berglöf+A%22">Berglöf A</searchLink>; WaterAid, Stockholm, Sweden.<br /><searchLink fieldCode="AU" term="%22Bombaywala+S%22">Bombaywala S</searchLink>; Department of Biomedical Sciences, Faculty of Medicine and Health Sciences, Ghent University, Ghent, Belgium; VIB-UGent Center for Medical Biotechnology, VIB, Ghent, Belgium.<br /><searchLink fieldCode="AU" term="%22Calvert-Joshua+T%22">Calvert-Joshua T</searchLink>; Public Health Alliance for Genomic Epidemiology, University of the Western Cape, Bellville, South Africa.<br /><searchLink fieldCode="AU" term="%22Kaboré+B%22">Kaboré B</searchLink>; Unité de Recherche Clinique de Nanoro, Institut de Recherche en Sciences de la Santé, Nanoro, Burkina Faso.<br /><searchLink fieldCode="AU" term="%22Kingpriest+P%22">Kingpriest P</searchLink>; Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK.<br /><searchLink fieldCode="AU" term="%22Lang+T%22">Lang T</searchLink>; Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK.<br /><searchLink fieldCode="AU" term="%22Levy+JI%22">Levy JI</searchLink>; Public Health Alliance for Genomic Epidemiology, University of the Western Cape, Bellville, South Africa; Department of Translational Medicine, The Scripps Research Institute, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Lompo+P%22">Lompo P</searchLink>; Unité de Recherche Clinique de Nanoro, Institut de Recherche en Sciences de la Santé, Nanoro, Burkina Faso.<br /><searchLink fieldCode="AU" term="%22Lyimo+E%22">Lyimo E</searchLink>; Tanga Centre, National Institute for Medical Research, Tanga, Tanzania.<br /><searchLink fieldCode="AU" term="%22Martens+L%22">Martens L</searchLink>; Department of Biomedical Sciences, Faculty of Medicine and Health Sciences, Ghent University, Ghent, Belgium; VIB-UGent Center for Medical Biotechnology, VIB, Ghent, Belgium.<br /><searchLink fieldCode="AU" term="%22Mavoko+HM%22">Mavoko HM</searchLink>; Tropical Medicine Department, University of Kinshasa, Kinshasa, Democratic Republic of the Congo.<br /><searchLink fieldCode="AU" term="%22Mesuere+B%22">Mesuere B</searchLink>; Department of Applied Mathematics, Computer Science and Statistics, Ghent University, Ghent, Belgium.<br /><searchLink fieldCode="AU" term="%22Moremi+N%22">Moremi N</searchLink>; National Public Health Laboratory, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Mulder+N%22">Mulder N</searchLink>; Computational Biology Division, Department of Integrative Biomedical Sciences, IDM, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa.<br /><searchLink fieldCode="AU" term="%22Ndure+SL%22">Ndure SL</searchLink>; Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK.<br /><searchLink fieldCode="AU" term="%22Rameto+MA%22">Rameto MA</searchLink>; Ethiopian Public Health Institute, Addis Ababa, Ethiopia.<br /><searchLink fieldCode="AU" term="%22Rinke+de+Wit+TF%22">Rinke de Wit TF</searchLink>; Amsterdam Institute for Global Health and Development, Department of Global Health, Amsterdam University Medical Center, Amsterdam, Netherlands.<br /><searchLink fieldCode="AU" term="%22Sebukoto+H%22">Sebukoto H</searchLink>; Tanga Centre, National Institute for Medical Research, Tanga, Tanzania.<br /><searchLink fieldCode="AU" term="%22Smith+E%22">Smith E</searchLink>; Public Health Alliance for Genomic Epidemiology, University of the Western Cape, Bellville, South Africa; Center for Infectious Disease Research and Policy, University of Minnesota, Minneapolis, MN, USA.<br /><searchLink fieldCode="AU" term="%22Tahita+MC%22">Tahita MC</searchLink>; Unité de Recherche Clinique de Nanoro, Institut de Recherche en Sciences de la Santé, Nanoro, Burkina Faso.<br /><searchLink fieldCode="AU" term="%22Tevuzula+VM%22">Tevuzula VM</searchLink>; Tropical Medicine Department, University of Kinshasa, Kinshasa, Democratic Republic of the Congo.<br /><searchLink fieldCode="AU" term="%22Tippett+Barr+BA%22">Tippett Barr BA</searchLink>; Nyanja Health Research Institute, Salima, Malawi.<br /><searchLink fieldCode="AU" term="%22Tiwari+A%22">Tiwari A</searchLink>; Microbiology Unit, Department of Public Health, Finnish Institute for Health and Welfare, Kuopio, Finland; Department of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinki, Helsinki, Finland.<br /><searchLink fieldCode="AU" term="%22Tran+T%22">Tran T</searchLink>; Norwegian Research Centre, Bergen, Norway.<br /><searchLink fieldCode="AU" term="%22Ubomba-Jaswa+E%22">Ubomba-Jaswa E</searchLink>; Water Research Commission, Pretoria, South Africa.<br /><searchLink fieldCode="AU" term="%22Van+Den+Bossche+T%22">Van Den Bossche T</searchLink>; Department of Biomedical Sciences, Faculty of Medicine and Health Sciences, Ghent University, Ghent, Belgium; VIB-UGent Center for Medical Biotechnology, VIB, Ghent, Belgium.<br /><searchLink fieldCode="AU" term="%22Wolday+D%22">Wolday D</searchLink>; Ethiopian Public Health Institute, Addis Ababa, Ethiopia; Michael G DeGroote Institute for Infectious Diseases Research, Department of Biochemistry and Biomedical Sciences, Faculty of Health Sciences, McMaster University, Hamilton, ON, Canada.<br /><searchLink fieldCode="AU" term="%22Krolicka+A%22">Krolicka A</searchLink>; Norwegian Research Centre, Bergen, Norway.<br /><searchLink fieldCode="AU" term="%22Baraka+V%22">Baraka V</searchLink>; Tanga Centre, National Institute for Medical Research, Tanga, Tanzania.<br /><searchLink fieldCode="AU" term="%22Pitkänen+T%22">Pitkänen T</searchLink>; Microbiology Unit, Department of Public Health, Finnish Institute for Health and Welfare, Kuopio, Finland; Department of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinki, Helsinki, Finland.<br /><searchLink fieldCode="AU" term="%22Lood+R%22">Lood R</searchLink>; Division of Infection Medicine, Department of Clinical Sciences Lund, Faculty of Medicine, Lund University, Lund, Sweden. Electronic address: rolf.lood@med.lu.se.
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  Data: <searchLink fieldCode="JN" term="%22101769019%22">The Lancet. Microbe</searchLink> [Lancet Microbe] 2026 May 28, pp. 101426. <i>Date of Electronic Publication: </i>2026 May 28.
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