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Harnessing genomic and bioinformatics for surveillance of pathogens in Africa: a scoping review of existing training and gaps in training.

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Title: Harnessing genomic and bioinformatics for surveillance of pathogens in Africa: a scoping review of existing training and gaps in training.
Authors: Kingpriest PT; The Global Health Network, Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK. onifaspaul@gmail.com., Bok J; The Global Health Network, Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK., Lompo P; Institut de Recherche en Sciences de la Santé - Clinical Research Unit of Nanoro (IRSS-CRUN), Nanoro, Burkina Faso., Ngelesi E; Department of Tropical Medicine, University of Kinshasa, Kinshasa, Democratic Republic of the Congo., Mwaka J; The Global Health Network, Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK., Ndure SL; The Global Health Network, Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK., Moremi N; National Public Health Laboratory, Dar es Salaam, Tanzania., Baraka V; The National Institute for Medical Research, Tanga, Tanzania., Den Bossche TV; VIB - UGent Center for Medical Biotechnology, VIB, Ghent, 9052, Belgium.; Department of Biomolecular Medicine, Faculty of Medicine and Health Sciences, Ghent University, Ghent, 9000, Belgium., Bombaywala S; VIB - UGent Center for Medical Biotechnology, VIB, Ghent, 9052, Belgium.; Department of Biomolecular Medicine, Faculty of Medicine and Health Sciences, Ghent University, Ghent, 9000, Belgium., Mesuere B; Department of Mathematics, Statistics and Computer Science, Faculty of Sciences, Ghent University, Ghent, 9000, Belgium., Martens L; VIB - UGent Center for Medical Biotechnology, VIB, Ghent, 9052, Belgium.; Department of Biomolecular Medicine, Faculty of Medicine and Health Sciences, Ghent University, Ghent, 9000, Belgium., Lang T; The Global Health Network, Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK.
Source: BMC infectious diseases [BMC Infect Dis] 2026 May 29. Date of Electronic Publication: 2026 May 29.
Publication Type: Journal Article; Systematic Review
Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100968551 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1471-2334 (Electronic) Linking ISSN: 14712334 NLM ISO Abbreviation: BMC Infect Dis Subsets: MEDLINE
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  Data: Harnessing genomic and bioinformatics for surveillance of pathogens in Africa: a scoping review of existing training and gaps in training.
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  Data: <searchLink fieldCode="AU" term="%22Kingpriest+PT%22">Kingpriest PT</searchLink>; The Global Health Network, Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK. onifaspaul@gmail.com.<br /><searchLink fieldCode="AU" term="%22Bok+J%22">Bok J</searchLink>; The Global Health Network, Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK.<br /><searchLink fieldCode="AU" term="%22Lompo+P%22">Lompo P</searchLink>; Institut de Recherche en Sciences de la Santé - Clinical Research Unit of Nanoro (IRSS-CRUN), Nanoro, Burkina Faso.<br /><searchLink fieldCode="AU" term="%22Ngelesi+E%22">Ngelesi E</searchLink>; Department of Tropical Medicine, University of Kinshasa, Kinshasa, Democratic Republic of the Congo.<br /><searchLink fieldCode="AU" term="%22Mwaka+J%22">Mwaka J</searchLink>; The Global Health Network, Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK.<br /><searchLink fieldCode="AU" term="%22Ndure+SL%22">Ndure SL</searchLink>; The Global Health Network, Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK.<br /><searchLink fieldCode="AU" term="%22Moremi+N%22">Moremi N</searchLink>; National Public Health Laboratory, Dar es Salaam, Tanzania.<br /><searchLink fieldCode="AU" term="%22Baraka+V%22">Baraka V</searchLink>; The National Institute for Medical Research, Tanga, Tanzania.<br /><searchLink fieldCode="AU" term="%22Den+Bossche+TV%22">Den Bossche TV</searchLink>; VIB - UGent Center for Medical Biotechnology, VIB, Ghent, 9052, Belgium.; Department of Biomolecular Medicine, Faculty of Medicine and Health Sciences, Ghent University, Ghent, 9000, Belgium.<br /><searchLink fieldCode="AU" term="%22Bombaywala+S%22">Bombaywala S</searchLink>; VIB - UGent Center for Medical Biotechnology, VIB, Ghent, 9052, Belgium.; Department of Biomolecular Medicine, Faculty of Medicine and Health Sciences, Ghent University, Ghent, 9000, Belgium.<br /><searchLink fieldCode="AU" term="%22Mesuere+B%22">Mesuere B</searchLink>; Department of Mathematics, Statistics and Computer Science, Faculty of Sciences, Ghent University, Ghent, 9000, Belgium.<br /><searchLink fieldCode="AU" term="%22Martens+L%22">Martens L</searchLink>; VIB - UGent Center for Medical Biotechnology, VIB, Ghent, 9052, Belgium.; Department of Biomolecular Medicine, Faculty of Medicine and Health Sciences, Ghent University, Ghent, 9000, Belgium.<br /><searchLink fieldCode="AU" term="%22Lang+T%22">Lang T</searchLink>; The Global Health Network, Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK.
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  Data: <searchLink fieldCode="JN" term="%22100968551%22">BMC infectious diseases</searchLink> [BMC Infect Dis] 2026 May 29. <i>Date of Electronic Publication: </i>2026 May 29.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22BioMed+Central%22">BioMed Central </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>100968551 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1471-2334 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2214712334%22">14712334 </searchLink><i>NLM ISO Abbreviation: </i>BMC Infect Dis <i>Subsets: </i>MEDLINE
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