Identifying similar transcripts in a related organism from de Bruijn graphs of RNA-Seq data, with applications to the study of salt and waterlogging tolerance in Melilotus.
Saved in:
| Title: | Identifying similar transcripts in a related organism from de Bruijn graphs of RNA-Seq data, with applications to the study of salt and waterlogging tolerance in Melilotus. |
|---|---|
| Authors: | Fu S; Department of Biochemistry & Biophysics, Texas A&M University, College Station, 77843, TX, USA., Chang PL; Molecular and Computational Biology Section, Department of Biological Sciences, University of Southern California, Los Angeles, 90089, CA, USA., Friesen ML; Molecular and Computational Biology Section, Department of Biological Sciences, University of Southern California, Los Angeles, 90089, CA, USA.; Department of Crop and Soil Sciences, Washington State University, Pullman, 99164, WA, USA.; Department of Plant Pathology, Washington State University, Pullman, 99164, WA, USA., Teakle NL; Centre for Ecohydrology, The University of Western Australia, 35 Stirling Highway, Crawley, 6009, WA, Australia.; School of Plant Biology (M084), Faculty of Natural and Agricultural Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, 6009, WA, Australia., Tarone AM; Department of Entomology, Texas A&M University, College Station, 77843, TX, USA., Sze SH; Department of Biochemistry & Biophysics, Texas A&M University, College Station, 77843, TX, USA. shsze@cse.tamu.edu.; Department of Computer Science and Engineering, Texas A&M University, College Station, 77843, TX, USA. shsze@cse.tamu.edu. |
| Source: | BMC genomics [BMC Genomics] 2019 Jun 06; Vol. 20 (Suppl 5), pp. 425. Date of Electronic Publication: 2019 Jun 06. |
| Publication Type: | Journal Article |
| Journal Info: | Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
|
Full text is not displayed to guests.
Login for full access.
|
|
| FullText | Links: – Type: pdflink Text: Availability: 1 |
|---|---|
| Header | DbId: mdl DbLabel: MEDLINE Ultimate An: 31167652 AccessLevel: 2 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
| IllustrationInfo | |
| Items | – Name: Title Label: Title Group: Ti Data: Identifying similar transcripts in a related organism from de Bruijn graphs of RNA-Seq data, with applications to the study of salt and waterlogging tolerance in Melilotus. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AU" term="%22Fu+S%22">Fu S</searchLink>; Department of Biochemistry & Biophysics, Texas A&M University, College Station, 77843, TX, USA.<br /><searchLink fieldCode="AU" term="%22Chang+PL%22">Chang PL</searchLink>; Molecular and Computational Biology Section, Department of Biological Sciences, University of Southern California, Los Angeles, 90089, CA, USA.<br /><searchLink fieldCode="AU" term="%22Friesen+ML%22">Friesen ML</searchLink>; Molecular and Computational Biology Section, Department of Biological Sciences, University of Southern California, Los Angeles, 90089, CA, USA.; Department of Crop and Soil Sciences, Washington State University, Pullman, 99164, WA, USA.; Department of Plant Pathology, Washington State University, Pullman, 99164, WA, USA.<br /><searchLink fieldCode="AU" term="%22Teakle+NL%22">Teakle NL</searchLink>; Centre for Ecohydrology, The University of Western Australia, 35 Stirling Highway, Crawley, 6009, WA, Australia.; School of Plant Biology (M084), Faculty of Natural and Agricultural Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, 6009, WA, Australia.<br /><searchLink fieldCode="AU" term="%22Tarone+AM%22">Tarone AM</searchLink>; Department of Entomology, Texas A&M University, College Station, 77843, TX, USA.<br /><searchLink fieldCode="AU" term="%22Sze+SH%22">Sze SH</searchLink>; Department of Biochemistry & Biophysics, Texas A&M University, College Station, 77843, TX, USA. shsze@cse.tamu.edu.; Department of Computer Science and Engineering, Texas A&M University, College Station, 77843, TX, USA. shsze@cse.tamu.edu. – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%22100965258%22">BMC genomics</searchLink> [BMC Genomics] 2019 Jun 06; Vol. 20 (Suppl 5), pp. 425. <i>Date of Electronic Publication: </i>2019 Jun 06. – Name: TypePub Label: Publication Type Group: TypPub Data: Journal Article – Name: TitleSource Label: Journal Info Group: Src Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22BioMed+Central%22">BioMed Central </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>100965258 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1471-2164 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2214712164%22">14712164 </searchLink><i>NLM ISO Abbreviation: </i>BMC Genomics <i>Subsets: </i>MEDLINE |
| PLink | https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=31167652 |
| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1186/s12864-019-5702-5 Languages: – Code: eng Text: English PhysicalDescription: Pagination: StartPage: 425 Titles: – TitleFull: Identifying similar transcripts in a related organism from de Bruijn graphs of RNA-Seq data, with applications to the study of salt and waterlogging tolerance in Melilotus. Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Fu S – PersonEntity: Name: NameFull: Chang PL – PersonEntity: Name: NameFull: Friesen ML – PersonEntity: Name: NameFull: Teakle NL – PersonEntity: Name: NameFull: Tarone AM – PersonEntity: Name: NameFull: Sze SH IsPartOfRelationships: – BibEntity: Dates: – D: 06 M: 06 Text: 2019 Jun 06 Type: published Y: 2019 Identifiers: – Type: issn-electronic Value: 1471-2164 Numbering: – Type: volume Value: 20 – Type: issue Value: Suppl 5 Titles: – TitleFull: BMC genomics Type: main |
| ResultId | 1 |
