Structural variant-based pangenome construction has low sensitivity to variability of haplotype-resolved bovine assemblies.
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| Title: | Structural variant-based pangenome construction has low sensitivity to variability of haplotype-resolved bovine assemblies. |
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| Authors: | Leonard AS; Animal Genomics, ETH Zurich, Universitaetstrasse 2, 8006, Zurich, Switzerland. alexander.leonard@usys.ethz.ch., Crysnanto D; Animal Genomics, ETH Zurich, Universitaetstrasse 2, 8006, Zurich, Switzerland., Fang ZH; Animal Genomics, ETH Zurich, Universitaetstrasse 2, 8006, Zurich, Switzerland., Heaton MP; U.S. Meat Animal Research Center, USDA-ARS, 844 Road 313, Clay Center, NE, 68933, USA., Vander Ley BL; Great Plains Veterinary Educational Center, University of Nebraska-Lincoln, Lincoln, NE, 68588, USA., Herrera C; Clinic of Reproductive Medicine, Department for Farm Animals, University of Zurich, 8057, Zurich, Switzerland., Bollwein H; Clinic of Reproductive Medicine, Department for Farm Animals, University of Zurich, 8057, Zurich, Switzerland., Bickhart DM; Dairy Forage Research Center, USDA-ARS, 1925 Linden Drive, Madison, WI, 53706, USA., Kuhn KL; U.S. Meat Animal Research Center, USDA-ARS, 844 Road 313, Clay Center, NE, 68933, USA., Smith TPL; U.S. Meat Animal Research Center, USDA-ARS, 844 Road 313, Clay Center, NE, 68933, USA., Rosen BD; Animal Genomics and Improvement Laboratory, USDA-ARS, 10300 Baltimore Ave, Beltsville, MD, 20705, USA. ben.rosen@usda.gov., Pausch H; Animal Genomics, ETH Zurich, Universitaetstrasse 2, 8006, Zurich, Switzerland. hubert.pausch@usys.ethz.ch. |
| Source: | Nature communications [Nat Commun] 2022 May 31; Vol. 13 (1), pp. 3012. Date of Electronic Publication: 2022 May 31. |
| Publication Type: | Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, Non-U.S. Gov't |
| Journal Info: | Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
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| ISSN: | 2041-1723 |
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| DOI: | 10.1038/s41467-022-30680-2 |
