GenErode: a bioinformatics pipeline to investigate genome erosion in endangered and extinct species.
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| Title: | GenErode: a bioinformatics pipeline to investigate genome erosion in endangered and extinct species. |
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| Authors: | Kutschera VE; Department of Biochemistry and Biophysics, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Stockholm University, Solna, Sweden. verena.kutschera@scilifelab.se., Kierczak M; Department of Cell and Molecular Biology, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Uppsala University, Uppsala, Sweden., van der Valk T; Department of Cell and Molecular Biology, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Uppsala University, Uppsala, Sweden., von Seth J; Centre for Palaeogenetics, Svante Arrhenius väg 20C, 106 91, Stockholm, Sweden.; Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden.; Department of Zoology, Stockholm University, 106 91, Stockholm, Sweden., Dussex N; Centre for Palaeogenetics, Svante Arrhenius väg 20C, 106 91, Stockholm, Sweden.; Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden.; Department of Zoology, Stockholm University, 106 91, Stockholm, Sweden., Lord E; Centre for Palaeogenetics, Svante Arrhenius väg 20C, 106 91, Stockholm, Sweden.; Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden.; Department of Zoology, Stockholm University, 106 91, Stockholm, Sweden., Dehasque M; Centre for Palaeogenetics, Svante Arrhenius väg 20C, 106 91, Stockholm, Sweden.; Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden.; Department of Zoology, Stockholm University, 106 91, Stockholm, Sweden., Stanton DWG; Centre for Palaeogenetics, Svante Arrhenius väg 20C, 106 91, Stockholm, Sweden.; Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden., Khoonsari PE; Department of Biochemistry and Biophysics, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Stockholm University, Solna, Sweden., Nystedt B; Department of Cell and Molecular Biology, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Uppsala University, Uppsala, Sweden., Dalén L; Centre for Palaeogenetics, Svante Arrhenius väg 20C, 106 91, Stockholm, Sweden.; Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden.; Department of Zoology, Stockholm University, 106 91, Stockholm, Sweden., Díez-Del-Molino D; Centre for Palaeogenetics, Svante Arrhenius väg 20C, 106 91, Stockholm, Sweden. diez.molino@gmail.com.; Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden. diez.molino@gmail.com.; Department of Zoology, Stockholm University, 106 91, Stockholm, Sweden. diez.molino@gmail.com. |
| Source: | BMC bioinformatics [BMC Bioinformatics] 2022 Jun 13; Vol. 23 (1), pp. 228. Date of Electronic Publication: 2022 Jun 13. |
| Publication Type: | Journal Article |
| Journal Info: | Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105 (Electronic) Linking ISSN: 14712105 NLM ISO Abbreviation: BMC Bioinformatics Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
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| ISSN: | 1471-2105 |
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| DOI: | 10.1186/s12859-022-04757-0 |
