BenchAMRking: a Galaxy-based platform for illustrating the major issues associated with current antimicrobial resistance (AMR) gene prediction workflows.
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| Title: | BenchAMRking: a Galaxy-based platform for illustrating the major issues associated with current antimicrobial resistance (AMR) gene prediction workflows. |
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| Authors: | Strepis N; Department of Medical Microbiology and Infectious Diseases, Erasmus University Medical Centre (Erasmus MC), Rotterdam, The Netherlands., Dollee D; Department of Pathology and Clinical Bioinformatics, Erasmus University Medical Centre (Erasmus MC), Rotterdam, The Netherlands., Vrins D; Department of Pathology and Clinical Bioinformatics, Erasmus University Medical Centre (Erasmus MC), Rotterdam, The Netherlands., Vanneste K; Transversal activities in Applied Genomics, Sciensano, Brussels, Belgium., Bogaerts B; Transversal activities in Applied Genomics, Sciensano, Brussels, Belgium., Carrillo C; Canadian Food Inspection Agency, Ottawa, ON, K1A 0Y9, Canada., Bharat A; National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, R3E 3R2, Canada., Horan K; Microbiological Diagnostic Unit Public Health Laboratory (MDU-PHL), Department of Microbiology & Immunology, University of Melbourne at the Peter Doherty Institute for Infection & Immunity, Melbourne, VIC, Australia., Sherry NL; Microbiological Diagnostic Unit Public Health Laboratory (MDU-PHL), Department of Microbiology & Immunology, University of Melbourne at the Peter Doherty Institute for Infection & Immunity, Melbourne, VIC, Australia., Seemann T; Microbiological Diagnostic Unit Public Health Laboratory (MDU-PHL), Department of Microbiology & Immunology, University of Melbourne at the Peter Doherty Institute for Infection & Immunity, Melbourne, VIC, Australia., Howden BP; Microbiological Diagnostic Unit Public Health Laboratory (MDU-PHL), Department of Microbiology & Immunology, University of Melbourne at the Peter Doherty Institute for Infection & Immunity, Melbourne, VIC, Australia., Hiltemann S; Institute of Pharmaceutical Sciences, Faculty of Chemistry and Pharmacy, University of Freiburg, 79104, Freiburg, Germany., Chindelevitch L; MRC Centre for Global Infectious Disease Analysis, Imperial College London, London, England, UK. l.chindelevitch@imperial.ac.uk., Stubbs AP; Department of Medical Microbiology and Infectious Diseases, Erasmus University Medical Centre (Erasmus MC), Rotterdam, The Netherlands., Hays JP; Department of Medical Microbiology and Infectious Diseases, Erasmus University Medical Centre (Erasmus MC), Rotterdam, The Netherlands. j.hays@erasmusmc.nl. |
| Source: | BMC genomics [BMC Genomics] 2025 Jan 10; Vol. 26 (1), pp. 27. Date of Electronic Publication: 2025 Jan 10. |
| Publication Type: | Journal Article |
| Journal Info: | Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
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| ISSN: | 1471-2164 |
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| DOI: | 10.1186/s12864-024-11158-5 |
