NEURD offers automated proofreading and feature extraction for connectomics.

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Title: NEURD offers automated proofreading and feature extraction for connectomics.
Authors: Celii B; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.; Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA.; Research and Exploratory Development Department, Johns Hopkins University Applied Physics Laboratory, Baltimore, MD, USA., Papadopoulos S; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.; Department of Ophthalmology, Stanford University, Stanford, CA, USA.; Byers Eye Institute, Stanford University, Stanford, CA, USA.; Stanford Bio-X, Stanford University, Stanford, CA, USA.; Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA, USA., Ding Z; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.; Department of Ophthalmology, Stanford University, Stanford, CA, USA.; Byers Eye Institute, Stanford University, Stanford, CA, USA.; Stanford Bio-X, Stanford University, Stanford, CA, USA.; Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA, USA., Fahey PG; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.; Department of Ophthalmology, Stanford University, Stanford, CA, USA.; Byers Eye Institute, Stanford University, Stanford, CA, USA.; Stanford Bio-X, Stanford University, Stanford, CA, USA.; Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA, USA., Wang E; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA., Papadopoulos C; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA., Kunin AB; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.; Department of Mathematics, Creighton University, Omaha, NE, USA., Patel S; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.; Department of Ophthalmology, Stanford University, Stanford, CA, USA.; Byers Eye Institute, Stanford University, Stanford, CA, USA.; Stanford Bio-X, Stanford University, Stanford, CA, USA.; Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA, USA., Bae JA; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Electrical and Computer Engineering Department, Princeton University, Princeton, NJ, USA., Bodor AL; Allen Institute for Brain Science, Seattle, WA, USA., Brittain D; Allen Institute for Brain Science, Seattle, WA, USA., Buchanan J; Allen Institute for Brain Science, Seattle, WA, USA., Bumbarger DJ; Allen Institute for Brain Science, Seattle, WA, USA., Castro MA; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Cobos E; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA., Dorkenwald S; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Computer Science Department, Princeton University, Princeton, NJ, USA., Elabbady L; Allen Institute for Brain Science, Seattle, WA, USA., Halageri A; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Jia Z; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Computer Science Department, Princeton University, Princeton, NJ, USA., Jordan C; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Kapner D; Allen Institute for Brain Science, Seattle, WA, USA., Kemnitz N; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Kinn S; Allen Institute for Brain Science, Seattle, WA, USA., Lee K; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Brain and Cognitive Sciences Department, Massachusetts Institute of Technology, Cambridge, MA, USA., Li K; Computer Science Department, Princeton University, Princeton, NJ, USA., Lu R; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Macrina T; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Computer Science Department, Princeton University, Princeton, NJ, USA., Mahalingam G; Allen Institute for Brain Science, Seattle, WA, USA., Mitchell E; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Mondal SS; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Electrical and Computer Engineering Department, Princeton University, Princeton, NJ, USA., Mu S; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Nehoran B; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Computer Science Department, Princeton University, Princeton, NJ, USA., Popovych S; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Computer Science Department, Princeton University, Princeton, NJ, USA., Schneider-Mizell CM; Allen Institute for Brain Science, Seattle, WA, USA., Silversmith W; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Takeno M; Allen Institute for Brain Science, Seattle, WA, USA., Torres R; Allen Institute for Brain Science, Seattle, WA, USA., Turner NL; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.; Computer Science Department, Princeton University, Princeton, NJ, USA., Wong W; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Wu J; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Yu SC; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Yin W; Allen Institute for Brain Science, Seattle, WA, USA., Xenes D; Research and Exploratory Development Department, Johns Hopkins University Applied Physics Laboratory, Baltimore, MD, USA., Kitchell LM; Research and Exploratory Development Department, Johns Hopkins University Applied Physics Laboratory, Baltimore, MD, USA., Rivlin PK; Research and Exploratory Development Department, Johns Hopkins University Applied Physics Laboratory, Baltimore, MD, USA., Rose VA; Research and Exploratory Development Department, Johns Hopkins University Applied Physics Laboratory, Baltimore, MD, USA., Bishop CA; Research and Exploratory Development Department, Johns Hopkins University Applied Physics Laboratory, Baltimore, MD, USA., Wester B; Research and Exploratory Development Department, Johns Hopkins University Applied Physics Laboratory, Baltimore, MD, USA., Froudarakis E; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.; Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, Heraklion, Greece., Walker EY; Department of Physiology and Biophysics, University of Washington, Seattle, WA, USA.; UW Computational Neuroscience Center, University of Washington, Seattle, WA, USA., Sinz F; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.; Institute for Bioinformatics and Medical Informatics, University Tübingen, Tübingen, Germany.; Institute of Computer Science and Campus Institute Data Science, University Göttingen, Göttingen, Germany., Seung HS; Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA., Collman F; Allen Institute for Brain Science, Seattle, WA, USA., da Costa NM; Allen Institute for Brain Science, Seattle, WA, USA., Reid RC; Allen Institute for Brain Science, Seattle, WA, USA., Pitkow X; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.; Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA, USA.; Department of Machine Learning, Carnegie Mellon University, Pittsburgh, PA, USA.; Department of Computer Science, Rice University, Houston, TX, USA.; Institute for Artificial and Natural Intelligence, Pittsburgh, PA, USA., Tolias AS; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.; Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA.; Department of Ophthalmology, Stanford University, Stanford, CA, USA.; Byers Eye Institute, Stanford University, Stanford, CA, USA.; Stanford Bio-X, Stanford University, Stanford, CA, USA.; Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA, USA.; Human-Centered Artificial Intelligence Institute, Stanford University, Stanford, CA, USA.; Department of Electrical Engineering, Stanford University, Stanford, CA, USA., Reimer J; Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA. reimer@bcm.edu.; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA. reimer@bcm.edu.
Source: Nature [Nature] 2025 Apr; Vol. 640 (8058), pp. 487-496. Date of Electronic Publication: 2025 Apr 09.
Publication Type: Journal Article; Research Support, N.I.H., Extramural
Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE
Database: MEDLINE Ultimate
Description
ISSN:1476-4687
DOI:10.1038/s41586-025-08660-5