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Comparative transcriptome atlas as an assistive modality for complex classification of rare kidney cancers.

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Title: Comparative transcriptome atlas as an assistive modality for complex classification of rare kidney cancers.
Authors: Jikuya R; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan.; Laboratory for Cancer Genomics, RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa, Japan., Johnson TA; Laboratory for Cancer Genomics, RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa, Japan., Muraoka E; Department of Molecular Pathology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Noguchi G; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Maekawa S; Department of Urology, School of Medicine, Iwate Medical University, Morioka, Iwate, Japan., Obara W; Department of Urology, School of Medicine, Iwate Medical University, Morioka, Iwate, Japan., Numakura K; Department of Urology, Akita University Graduate School of Medicine, Akita, Japan., Habuchi T; Department of Urology, Akita University Graduate School of Medicine, Akita, Japan., Maejima K; Laboratory for Cancer Genomics, RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa, Japan., Sasagawa S; Laboratory for Cancer Genomics, RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa, Japan., Kanazashi Y; Laboratory for Cancer Genomics, RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa, Japan., Lee H; Department of Biomedical Science, Kyung Hee University, Seoul, South Korea.; Department of Precision Medicine, Kyung Hee University, Seoul, South Korea.; Department of Biochemistry and Molecular Biology, Kyung Hee University, Seoul, South Korea., Song WJ; Department of Biomedical Science, Kyung Hee University, Seoul, South Korea., Sasagawa H; Laboratory for Genotyping Development, RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa, Japan., Mitome T; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Ohtake S; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Kawaura S; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Iribe Y; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Aomori K; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Nagasaka H; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Tatenuma T; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Ueno D; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Komeya M; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Ito H; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Ito Y; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Muraoka K; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Kawahara T; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Furuya M; Department of Surgical Pathology, Hokkaido University Hospital, Sapporo, Japan., Kato I; Department of Molecular Pathology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Hamanoue H; Clinical Genetics Department, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Nishiyama A; Department of Immunology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan.; Advanced Medical Research Center, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Tamura T; Department of Immunology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan.; Advanced Medical Research Center, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Baba M; Laboratory of Cancer Metabolism, International Research Center for Medical Sciences, Kumamoto University, Kumamoto, Japan., Suda T; Laboratory of Cancer Metabolism, International Research Center for Medical Sciences, Kumamoto University, Kumamoto, Japan., Kodama T; Laboratory for Systems Biology and Medicine, Research Center for Advanced Science and Technology, University of Tokyo, Tokyo, Japan., Ogawa T; Department of Regenerative Medicine, Yokohama City University, Yokohama, Kanagawa, Japan., Uemura H; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Yao M; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Tsuzuki T; Department of Surgical Pathology, Aichi Medical University Hospital, Nagakute, Aichi, Japan., Nagashima Y; Department of Surgical Pathology, Tokyo Women's Medical University, Tokyo, Japan., Miura Y; Department of Medical Oncology, The Cancer Institute Hospital of Japanese Foundation for Cancer Research, Tokyo, Japan., Kimura G; Department of Urology, Nippon Medical School, Tokyo, Japan., Imoto S; Human Genome Center, Institute of Medical Science, University of Tokyo, Tokyo, Japan., Momozawa Y; Laboratory for Genotyping Development, RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa, Japan., Fujii S; Department of Molecular Pathology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Makiyama K; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan., Hasegawa T; M&D Data Science Center, Institute of Integrated Research, Institute of Science Tokyo, Tokyo, Japan., Shuch BM; Institute of Urologic Oncology, UCLA School of Medicine, Los Angeles, CA, USA., Ricketts CJ; Urologic Oncology Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA., Schmidt LS; Urologic Oncology Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.; Basic Science Program, Frederick National Laboratory for Cancer Research, Frederick, MD, USA., Linehan WM; Urologic Oncology Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA., Nakagawa H; Laboratory for Cancer Genomics, RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa, Japan. hidewaki@riken.jp., Hasumi H; Department of Urology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan. hasumi@yokohama-cu.ac.jp.
Source: Nature communications [Nat Commun] 2025 Nov 24; Vol. 16 (1), pp. 10340. Date of Electronic Publication: 2025 Nov 24.
Publication Type: Journal Article; Comparative Study
Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE
Database: MEDLINE Ultimate
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ISSN:2041-1723
DOI:10.1038/s41467-025-65303-z