CelLink: integrating single-cell multi-omics data with weak feature linkage and imbalanced cell populations.

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Title: CelLink: integrating single-cell multi-omics data with weak feature linkage and imbalanced cell populations.
Authors: Luo X; Gilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, United States., Huang Y; Gilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, United States., Zeng H; Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI 48109, United States., Tao Y; Department of Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, MI 48109, United States., Bao X; Department of Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, MI 48109, United States., Feng F; Division of Diabetes, Endocrinology and Metabolism, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37240, United States., Hopkirk AL; Division of Diabetes, Endocrinology and Metabolism, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37240, United States., Pham T; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, United States.; Mass Spectrometry Research Center, Vanderbilt University School of Medicine, Nashville, TN 37232, United States., Bate TSR; Division of Diabetes, Endocrinology and Metabolism, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37240, United States., Saunders DC; Division of Diabetes, Endocrinology and Metabolism, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37240, United States., Orchard P; Gilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, United States., Robertson C; Gilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, United States., Shrestha S; Center for Stem Cell Biology, Vanderbilt University, Nashville, TN 37232, United States., Spraggins JM; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, United States.; Mass Spectrometry Research Center, Vanderbilt University School of Medicine, Nashville, TN 37232, United States., Cartailler JP; Center for Stem Cell Biology, Vanderbilt University, Nashville, TN 37232, United States., Parker SCJ; Gilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, United States., Brissova M; Division of Diabetes, Endocrinology and Metabolism, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37240, United States., Liu J; Gilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, United States.; Department of Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, MI 48109, United States.
Source: Nucleic acids research [Nucleic Acids Res] 2025 Nov 26; Vol. 53 (22).
Publication Type: Journal Article
Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: CelLink: integrating single-cell multi-omics data with weak feature linkage and imbalanced cell populations.
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  Data: <searchLink fieldCode="AU" term="%22Luo+X%22">Luo X</searchLink>; Gilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, United States.<br /><searchLink fieldCode="AU" term="%22Huang+Y%22">Huang Y</searchLink>; Gilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, United States.<br /><searchLink fieldCode="AU" term="%22Zeng+H%22">Zeng H</searchLink>; Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI 48109, United States.<br /><searchLink fieldCode="AU" term="%22Tao+Y%22">Tao Y</searchLink>; Department of Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, MI 48109, United States.<br /><searchLink fieldCode="AU" term="%22Bao+X%22">Bao X</searchLink>; Department of Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, MI 48109, United States.<br /><searchLink fieldCode="AU" term="%22Feng+F%22">Feng F</searchLink>; Division of Diabetes, Endocrinology and Metabolism, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37240, United States.<br /><searchLink fieldCode="AU" term="%22Hopkirk+AL%22">Hopkirk AL</searchLink>; Division of Diabetes, Endocrinology and Metabolism, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37240, United States.<br /><searchLink fieldCode="AU" term="%22Pham+T%22">Pham T</searchLink>; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, United States.; Mass Spectrometry Research Center, Vanderbilt University School of Medicine, Nashville, TN 37232, United States.<br /><searchLink fieldCode="AU" term="%22Bate+TSR%22">Bate TSR</searchLink>; Division of Diabetes, Endocrinology and Metabolism, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37240, United States.<br /><searchLink fieldCode="AU" term="%22Saunders+DC%22">Saunders DC</searchLink>; Division of Diabetes, Endocrinology and Metabolism, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37240, United States.<br /><searchLink fieldCode="AU" term="%22Orchard+P%22">Orchard P</searchLink>; Gilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, United States.<br /><searchLink fieldCode="AU" term="%22Robertson+C%22">Robertson C</searchLink>; Gilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, United States.<br /><searchLink fieldCode="AU" term="%22Shrestha+S%22">Shrestha S</searchLink>; Center for Stem Cell Biology, Vanderbilt University, Nashville, TN 37232, United States.<br /><searchLink fieldCode="AU" term="%22Spraggins+JM%22">Spraggins JM</searchLink>; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, United States.; Mass Spectrometry Research Center, Vanderbilt University School of Medicine, Nashville, TN 37232, United States.<br /><searchLink fieldCode="AU" term="%22Cartailler+JP%22">Cartailler JP</searchLink>; Center for Stem Cell Biology, Vanderbilt University, Nashville, TN 37232, United States.<br /><searchLink fieldCode="AU" term="%22Parker+SCJ%22">Parker SCJ</searchLink>; Gilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, United States.<br /><searchLink fieldCode="AU" term="%22Brissova+M%22">Brissova M</searchLink>; Division of Diabetes, Endocrinology and Metabolism, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37240, United States.<br /><searchLink fieldCode="AU" term="%22Liu+J%22">Liu J</searchLink>; Gilbert S. Omenn Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI 48109, United States.; Department of Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, MI 48109, United States.
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