ALARUM: Active One Health surveillance in LMICs to monitor and predict Antimicrobial Resistance Using Metagenomics - a cross-sectional study protocol.

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Title: ALARUM: Active One Health surveillance in LMICs to monitor and predict Antimicrobial Resistance Using Metagenomics - a cross-sectional study protocol.
Authors: van der Sande MAB; Global Public Health and Bioethics, Julius Center, University Medical Centre Utrecht, Utrecht, The Netherlands M.A.B.vanderSande@umcutrecht.nl., Valia D; Direction Régionale du Centre-Ouest/Clinical Research Unit of Nanoro, Institut de Recherche en Sciences de la Santé, Ouagadougou, Burkina Faso., Tigoi C; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Stoesser N; Modernising Medical Microbiology, University of Oxford Nuffield Department of Medicine, Oxford, UK.; National Institute for Health Research Health Protection Research, Unit Healthcare Associated Infections and Antimicrobial Resistance, University of Oxford, Oxford, UK.; National Institute for Health Research Oxford Biomedical Research Centre, Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Oxford, UK., Stamm L; Paediatric Research Centre, University Children's Hospital Basel, Basel, Switzerland., Marten A; Paediatric Research Centre, University Children's Hospital Basel, Basel, Switzerland., Riems B; Institute of Tropical Medicine Department of Public Health, Antwerp, Belgium., Musyimi R; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Sibidou Y; Direction Régionale du Centre-Ouest/Clinical Research Unit of Nanoro, Institut de Recherche en Sciences de la Santé, Ouagadougou, Burkina Faso., Schurch AC; Department Medical Microbiology, University Medical Centre Utrecht, Utrecht, The Netherlands., Tiendrebeogo EW; Direction Régionale du Centre-Ouest/Clinical Research Unit of Nanoro, Institut de Recherche en Sciences de la Santé, Ouagadougou, Burkina Faso., Mwaringa S; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Kohns Vasconcelos M; Paediatric Research Centre, University Children's Hospital Basel, Basel, Switzerland.; Institute for Medical Biometry and Epidemiology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany., Ingelbeen B; Institute of Tropical Medicine Department of Public Health, Antwerp, Belgium.; Department Infectious Disease Epidemiology, Julius Center, University Medical Centre Utrecht, Utrecht, The Netherlands., Tinto H; Institut de Recherche en Sciences de la Sante, Ouagadougou, Burkina Faso., Bielicki JA; Paediatric Research Centre, University Children's Hospital Basel, Basel, Switzerland.; Centre for Neonatal and Paediatric Infection, City St George's, University of London, London, UK., Cooper BS; Nuffield Department of Medicine, Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK., Berkley JA; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya.; Nuffield Department of Medicine, Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK., van Kleef E; Nuffield Department of Medicine, Centre for Tropical Medicine and Global Health, University of Oxford, Oxford, UK.
Source: BMJ open [BMJ Open] 2026 Feb 24; Vol. 16 (2), pp. e107465. Date of Electronic Publication: 2026 Feb 24.
Publication Type: Journal Article
Journal Info: Publisher: BMJ Publishing Group Ltd Country of Publication: England NLM ID: 101552874 Publication Model: Electronic Cited Medium: Internet ISSN: 2044-6055 (Electronic) Linking ISSN: 20446055 NLM ISO Abbreviation: BMJ Open Subsets: MEDLINE
Database: MEDLINE Ultimate
Description
ISSN:2044-6055
DOI:10.1136/bmjopen-2025-107465