Genomic analysis of Vibrio cholerae in Western Kenya (2015-2023) reveals persistence of pandemic ST69 and presence of the European-associated ST8 lineage.

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Title: Genomic analysis of Vibrio cholerae in Western Kenya (2015-2023) reveals persistence of pandemic ST69 and presence of the European-associated ST8 lineage.
Authors: Kipkirui EC; Kenya Medical Research Institute, Walter Reed Army Institute of Research-Africa, Kericho, Kenya. erick.kipkirui@usamru-k.org., Natasha V; Kenya Medical Research Institute, Walter Reed Army Institute of Research-Africa, Kericho, Kenya., Kigen C; Kenya Medical Research Institute, Walter Reed Army Institute of Research-Africa, Kericho, Kenya., Muturi JW; Kenya Medical Research Institute, Walter Reed Army Institute of Research-Africa, Kericho, Kenya., Kirera RK; Kenya Medical Research Institute, Walter Reed Army Institute of Research-Africa, Kericho, Kenya., Koech MC; Kenya Medical Research Institute, Walter Reed Army Institute of Research-Africa, Kericho, Kenya., Kirui MC; Kenya Medical Research Institute, Walter Reed Army Institute of Research-Africa, Kericho, Kenya., Kipkemoi NC; Kenya Medical Research Institute, Walter Reed Army Institute of Research-Africa, Kericho, Kenya., Ndonye JN; Kenya Medical Research Institute, Walter Reed Army Institute of Research-Africa, Kericho, Kenya., Jerotich S; Kenya Medical Research Institute, Walter Reed Army Institute of Research-Africa, Kericho, Kenya., Sang LP; Walter Reed Army Institute of Research-Africa, Nairobi, Kenya., Musila L; Walter Reed Army Institute of Research-Africa, Nairobi, Kenya., Odundo EA; Kenya Medical Research Institute, Walter Reed Army Institute of Research-Africa, Kericho, Kenya.
Source: BMC genomics [BMC Genomics] 2026 May 29. Date of Electronic Publication: 2026 May 29.
Publication Type: Journal Article
Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE
Database: MEDLINE Ultimate
Description
ISSN:1471-2164
DOI:10.1186/s12864-026-12997-0